RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 PTPN4P29074 926 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 SDC2P34741 201 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 ANKRD23Q86SG2 305 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 HINT2Q9BX68 163 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 FARSBQ9NSD9 589 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 FPGTO14772 594 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 MT-ND1P03886 318 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 SLC30A10Q6XR72 485 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 RETREG1Q9H6L5 497 aa15.73■□□□□ 0.11
CACNA1A-202ENST00000573710 OR2AG2A6NM03 316 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 RBL1P28749 1068 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 GSTT1P30711 240 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 MLLT3P42568 568 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 GNPDA1P46926 289 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 GRIA4P48058 902 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 HERVK_113P62684 666 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TNK2Q07912 1038 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 RHEBQ15382 184 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 KATNAL2Q8IYT4 538 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 CRYBG2Q8N1P7 616 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 ZBTB45Q96K62 511 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SLC39A3Q9BRY0 314 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 MEMO1Q9Y316 297 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 KCNE2Q9Y6J6 123 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 GYPCP04921 128 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 FAM228BP0C875 321 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 HNRNPLP14866 589 aaKnown RBP eCLIP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 CHKAP35790 457 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 AVPR1BP47901 424 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 RGS6P49758 472 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TAS2R50P59544 299 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SPDYCQ5MJ68 293 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 PPP2R2DQ66LE6 453 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SLC2A7Q6PXP3 512 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 GPRIN3Q6ZVF9 776 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 CCDC80Q76M96 950 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 CYP2U1Q7Z449 544 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TMEM151BQ8IW70 566 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 LINC00116Q8NCU8 138 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TREX2Q9BQ50 279 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 POPDC2Q9HBU9 364 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 C2orf92A0A1B0GVN3 265 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 MUSKO15146 869 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TRBC1P01850 177 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 HCKP08631 526 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 ZNF8P17098 575 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 CAP2P40123 477 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 LEPRP48357 1165 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 CDKN1CP49918 316 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SLC34A1Q06495 639 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 BLMHQ13867 455 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 USP49Q70CQ1 688 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 ZNF184Q99676 751 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 NMUR1Q9HB89 426 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 LRIG2O94898 1065 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TFEBP19484 476 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TKTP29401 623 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 GRK6P43250 576 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SNRPFP62306 86 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SLC27A1Q6PCB7 646 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TMED8Q6PL24 325 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TNS4Q8IZW8 715 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 KBTBD8Q8NFY9 601 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 C12orf66Q96MD2 445 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 ACTL7BQ9Y614 415 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 STMND1H3BQB6 276 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SSX4O60224 188 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 DUSP4Q13115 394 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 FIP1L1Q6UN15 594 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 FRMD7Q6ZUT3 714 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 HMGB4Q8WW32 186 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 HERVK_113Q902F9 699 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 MYH15Q9Y2K3 1946 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 E9PAM4 449 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 NADKO95544 446 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 WDPCPO95876 746 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 VAMP1P23763 118 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 VASH1Q7L8A9 365 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 KIF18BQ86Y91 864 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 SHC3Q92529 594 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 ARL5BQ96KC2 179 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 ZNF570Q96NI8 536 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 TCF25Q9BQ70 676 aa15.72■□□□□ 0.11
CACNA1A-202ENST00000573710 NLRP1Q9C000 1473 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 MPPED1O15442 326 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 LTA4HP09960 611 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 LUMP51884 338 aaPredicted RBP15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 OR12D2P58182 307 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 C3orf33Q6P1S2 294 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 SCGB1C1Q8TD33 95 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 ENTPD3O75355 529 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 GLUD1P00367 558 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 SNRPB2P08579 225 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 SOCS4Q8WXH5 440 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 YIPF4Q9BSR8 244 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 MED11Q9P086 117 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 EFCAB6Q5THR3 1501 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 FXYD6-FXYD2A0A087WZ82 144 aa15.71■□□□□ 0.11
CACNA1A-202ENST00000573710 DDX3YO15523 660 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms