RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 AASSQ9UDR5 926 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 YIPF1Q9Y548 306 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 IGKV3D-15A0A087WSY6 115 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 A0A087X002 238 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 H0YIN7 160 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 J3KRW8 73 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 DAB1O75553 588 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM63AO94886 807 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 CCNDBP1O95273 360 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 CAVIN2O95810 425 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 IGHV4-38-2P0DP08 117 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 CBLP22681 906 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 EPHA2P29317 976 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 NR2C2P49116 596 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 THOP1P52888 689 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 PPP2R2BQ00005 443 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 MEP1AQ16819 746 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZSCAN23Q3MJ62 389 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZC2HC1BQ5TFG8 222 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 KIAA0930Q6ICG6 404 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 MFSD6Q6ZSS7 791 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 CRYBG2Q8N1P7 616 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 UCMAQ8WVF2 138 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 SMPDL3BQ92485 455 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF582Q96NG8 517 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 OR2A14Q96R47 310 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 ITPAQ9BY32 194 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 PLK3Q9H4B4 646 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZBTB20Q9HC78 741 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 SIX2Q9NPC8 291 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 PAG1Q9NWQ8 432 aa3.11□□□□□ -1.91
HMGB1P29-201ENST00000505659 A0A0G2JLW4 131 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 A6NL46 340 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 MAGEB17A8MXT2 336 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 A8MZ25 164 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 NR5A2O00482 541 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF500O60304 480 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF821O75541 412 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 RNASEH2AO75792 299 aaKnown RBP3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 HIST1H2ABP04908 130 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 CKMT2P17540 419 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 HIST1H2ADP20671 130 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 MAPK4P31152 587 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 PPARGP37231 505 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 TAF6P49848 677 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 TFAP4Q01664 338 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 LRMPQ12912 555 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 KRT32Q14532 448 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 SNX30Q5VWJ9 437 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 HAUS3Q68CZ6 603 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 KLHL35Q6PF15 583 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF790Q6PG37 636 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 SH2D5Q6ZV89 423 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 HIST3H2AQ7L7L0 130 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 WDTC1Q8N5D0 677 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 DDOQ99489 341 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 SRSF8Q9BRL6 282 aaKnown RBP3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 RHNO1Q9BSD3 238 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 HGH1Q9BTY7 390 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 MUC13Q9H3R2 512 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 SLA2Q9H6Q3 261 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 MIOSQ9NXC5 875 aa3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 DBNLQ9UJU6 430 aaKnown RBP3.1□□□□□ -1.91
HMGB1P29-201ENST00000505659 FRMD3A2A2Y4 597 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 CLIC2O15247 247 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 CREB3O43889 395 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 NGFP01138 241 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 ACP2P11117 423 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 CAMPP49913 170 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 MFAP5Q13361 173 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM187Q14656 261 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 PCGF3Q3KNV8 242 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 ASPRV1Q53RT3 343 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 FFAR4Q5NUL3 377 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 JADE1Q6IE81 842 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 TPRG1Q6ZUI0 275 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 DENND5BQ6ZUT9 1274 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 IKBIPQ70UQ0 350 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 OR2T12Q8NG77 320 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 OLIG1Q8TAK6 271 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 WDR20Q8TBZ3 569 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 ART5Q96L15 291 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 CMTM3Q96MX0 182 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF599Q96NL3 588 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 MYH16Q9H6N6 1097 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 DNAJC18Q9H819 358 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 DIAPH3Q9NSV4 1193 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 INTS10Q9NVR2 710 aaKnown RBP3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 TRMT1Q9NXH9 659 aaKnown RBP3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 CACNG5Q9UF02 275 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 KCNJ14Q9UNX9 436 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 MTMR6Q9Y217 621 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 MRPS28Q9Y2Q9 187 aaKnown RBP3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 PYGO1Q9Y3Y4 419 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 STK36Q9NRP7 1315 aa3.09□□□□□ -1.91
HMGB1P29-201ENST00000505659 A0A1W2PR77 199 aa3.08□□□□□ -1.92
HMGB1P29-201ENST00000505659 C15orf62A8K5M9 175 aa3.08□□□□□ -1.92
HMGB1P29-201ENST00000505659 ERI2A8K979 691 aaKnown RBP3.08□□□□□ -1.92
HMGB1P29-201ENST00000505659 SCAMP1O15126 338 aa3.08□□□□□ -1.92
HMGB1P29-201ENST00000505659 EXTL3O43909 919 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 637.8 ms