RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 BROXQ5VW32 411 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 RIOK2Q9BVS4 552 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 TBC1D17Q9HA65 648 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 NPEPPSL1A6NEC2 478 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 PIGNO95427 931 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 KELP23276 732 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 RPL6Q02878 288 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 AADACL4Q5VUY2 407 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 TMPRSS6Q8IU80 811 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 ZBTB45Q96K62 511 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 POLMQ9NP87 494 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 ZMYM2Q9UBW7 1377 aa16.21■□□□□ 0.19
CACNA1A-258ENST00000638029 SERPINB7O75635 380 aa16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 HOXC6P09630 235 aa16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 MAPTP10636 758 aaKnown RBP16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 POU2F1P14859 743 aa16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 BMT2Q1RMZ1 405 aa16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 PRAMEF17Q5VTA0 474 aa16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 LYPLAL1Q5VWZ2 237 aa16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 OR6K6Q8NGW6 343 aa16.21■□□□□ 0.18
CACNA1A-258ENST00000638029 MYH1P12882 1939 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 PTENP60484 403 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 SLC6A3Q01959 620 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 PDK3Q15120 406 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 GDF6Q6KF10 455 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 TMEM156Q8N614 296 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 MYH4Q9Y623 1939 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 ADAM8P78325 824 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 PLEKHG6Q3KR16 790 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 LSM12Q3MHD2 195 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 SP140LQ9H930 580 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 CXCR3P49682 368 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 MRPS6P82932 125 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 SMAD3P84022 425 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 RPL19P84098 196 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 RASGEF1BQ0VAM2 473 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 FBXO48Q5FWF7 155 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 C17orf64Q86WR6 236 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 TMEM86AQ8N2M4 240 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 OR5T1Q8NG75 326 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 APOPT1Q96IL0 206 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 EIF3KQ9UBQ5 218 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 NFASCO94856 1347 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 CARNS1A5YM72 827 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 AAGABQ6PD74 315 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 SLC43A3Q8NBI5 491 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 ZYG11BQ9C0D3 744 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 ATPIF1Q9UII2 106 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 CLCA3PQ9Y6N3 262 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 FAM86C2PA6NEL3 165 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 OR2AT4A6NND4 320 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 C9IYK1 514 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 TNFSF12O43508 249 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 RECQL5O94762 991 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 GADD45AP24522 165 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 CDH13P55290 713 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 GJA9P57773 515 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 PSME3P61289 254 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 EIF1ADQ8N9N8 165 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 FKBP7Q9Y680 259 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 PRAMEF33A0A0G2JMD5 474 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 A0A0G2JPF8 293 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 HNRNPCL3B7ZW38 293 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 PCDHGA12O60330 932 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 PRAMEF10O60809 474 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 HNRNPCL4P0DMR1 293 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 CCNB1P14635 433 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 GNB3P16520 340 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 SELENOVP59797 346 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 INAVAQ3KP66 663 aa16.2■□□□□ 0.18
CACNA1A-258ENST00000638029 OR2AG2A6NM03 316 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 MSR1P21757 451 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 AMIGO2Q86SJ2 522 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 OR10H4Q8NGA5 316 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 ZNF700Q9H0M5 742 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 NMUR1Q9HB89 426 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 GNEQ9Y223 722 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 FGF10O15520 208 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 HSPA12AO43301 675 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 BANF1O75531 89 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 CDH11P55287 796 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SEMG2Q02383 582 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 CHST9Q7L1S5 443 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SLC5A5Q92911 643 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 NIFKQ9BYG3 293 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 DEC1Q9P2X7 70 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 CORO2BQ9UQ03 480 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 IPO13O94829 963 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 MC4RP32245 332 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 RPP38P78345 283 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 DSG2Q14126 1118 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 TMC8Q8IU68 726 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 POLR3BQ9NW08 1133 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 KCNS2Q9ULS6 477 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 ST3GAL5Q9UNP4 418 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 E5RJQ4 531 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 TROAPQ12815 778 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SMARCB1Q12824 385 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms