RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 RGS4P49798 205 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 PTSQ03393 145 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 CAMK1Q14012 370 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 ZNF423Q2M1K9 1284 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 SPRED2Q7Z698 418 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 ADGRG6Q86SQ4 1221 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 SYVN1Q86TM6 617 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 PPFIBP2Q8ND30 876 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 OR56A4Q8NGH8 313 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 ESAMQ96AP7 390 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 ZSWIM3Q96MP5 696 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 SLC25A23Q9BV35 468 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 NUSAP1Q9BXS6 441 aaKnown RBP17.91■□□□□ 0.46
SMPD3-211ENST00000568373 CACNA2D2Q9NY47 1150 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 POLG2Q9UHN1 485 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 ZNF225Q9UK10 706 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 PACSIN3Q9UKS6 424 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 BTRCQ9Y297 605 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 ASB1Q9Y576 335 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 VPS4BO75351 444 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 TRIM16O95361 564 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 BAG2O95816 211 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 LINC00032P0C843 101 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 LHCGRP22888 699 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 PRDX3P30048 256 aaKnown RBP17.91■□□□□ 0.46
SMPD3-211ENST00000568373 CDC16Q13042 620 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 RBBP7Q16576 425 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 MMEL1Q495T6 779 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 EFL1Q7Z2Z2 1120 aaKnown RBP17.91■□□□□ 0.46
SMPD3-211ENST00000568373 GRASPQ7Z6J2 395 aaPredicted RBP17.91■□□□□ 0.46
SMPD3-211ENST00000568373 CHST14Q8NCH0 376 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 TUBGCP3Q96CW5 907 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 HCFC2Q9Y5Z7 792 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 WNT6Q9Y6F9 365 aa17.91■□□□□ 0.46
SMPD3-211ENST00000568373 ALPK3Q96L96 1907 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 A0A1W2PQ67 120 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 C5orf67F2Z3F1 127 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 FBP2O00757 339 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 GIPC1O14908 333 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 UROSP10746 265 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 ATP6V1C1P21283 382 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 GPX3P22352 226 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 DGKAP23743 735 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 PKNOX1P55347 436 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 CEACAM7Q14002 265 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 LRP8Q14114 963 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 GRB7Q14451 532 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 GPRC6AQ5T6X5 926 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 REP15Q6BDI9 236 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 PLPP6Q8IY26 295 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 ADGRG2Q8IZP9 1017 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 MYO1HQ8N1T3 1032 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 SNX31Q8N9S9 440 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 HIPK4Q8NE63 616 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 OR9I1Q8NGQ6 314 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 OTUB2Q96DC9 234 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 ZNF382Q96SR6 550 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 BRD9Q9H8M2 597 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 MARK1Q9P0L2 795 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 GIMAP2Q9UG22 337 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 TSR3Q9UJK0 312 aaKnown RBP17.9■□□□□ 0.46
SMPD3-211ENST00000568373 TIMM22Q9Y584 194 aa17.9■□□□□ 0.46
SMPD3-211ENST00000568373 WASH3PC4AMC7 463 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 MAP3K7O43318 606 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 TCF3P15923 654 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 ACADSP16219 412 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 LBPP18428 481 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 PCBP2Q15366 365 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMPD3-211ENST00000568373 KIF19Q2TAC6 998 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 ZNF697Q5TEC3 545 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 TMEM215Q68D42 235 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 PAOXQ6QHF9 649 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 GPRIN3Q6ZVF9 776 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 KIAA0907Q7Z7F0 614 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-211ENST00000568373 KBTBD6Q86V97 674 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 AHI1Q8N157 1196 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 ZBTB2Q8N680 514 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 OR2A12Q8NGT7 310 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 ZMYM5Q9UJ78 669 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 TNPO3Q9Y5L0 923 aaKnown RBP17.89■□□□□ 0.45
SMPD3-211ENST00000568373 RAD51BO15315 384 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 FFAR2O15552 330 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 CHEK2O96017 543 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 NSG1P42857 185 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 ZDHHC20Q5W0Z9 365 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 GDPD4Q6W3E5 623 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 FUNDC1Q8IVP5 155 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 PDPRQ8NCN5 879 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 PBXIP1Q96AQ6 731 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 SPATS2LQ9NUQ6 558 aaKnown RBP17.89■□□□□ 0.45
SMPD3-211ENST00000568373 ZDHHC3Q9NYG2 299 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 B4GALT6Q9UBX8 382 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 SARDHQ9UL12 918 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 ERVW-1Q9UQF0 538 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 PCDHGA7Q9Y5G6 932 aa17.89■□□□□ 0.45
SMPD3-211ENST00000568373 PLXNB3Q9ULL4 1909 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 NRP2O60462 931 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 S100BP04271 92 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-211ENST00000568373 HGFP14210 728 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 CEBPBP17676 345 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms