RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ATP4BP51164 291 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 ZDHHC20Q5W0Z9 365 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 GK5Q6ZS86 529 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 FRA10AC1Q70Z53 315 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 ZBTB2Q8N680 514 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 ESAMQ96AP7 390 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 LBHD1Q9BQE6 289 aaPredicted RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 HGH1Q9BTY7 390 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 DUS2Q9NX74 493 aaKnown RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 ZDHHC3Q9NYG2 299 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 TSR3Q9UJK0 312 aaKnown RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 PRPF19Q9UMS4 504 aaKnown RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 ASB1Q9Y576 335 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 E2F3O00716 465 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 TBX10O75333 385 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 WEE1P30291 646 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 NSG1P42857 185 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 SPINT3P49223 89 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 FASTKQ14296 549 aaKnown RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 CCDC6Q16204 474 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 ATP13A5Q4VNC0 1218 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 SYVN1Q86TM6 617 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 HPS6Q86YV9 775 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 C12orf76Q8N812 135 aaPredicted RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 OR56A4Q8NGH8 313 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 DTX3LQ8TDB6 740 aa25.54■■□□□ 1.68
COL13A1-214ENST00000522165 FBRSL1Q9HCM7 1045 aaKnown RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 EIF2B4Q9UI10 523 aaKnown RBP25.54■■□□□ 1.68
COL13A1-214ENST00000522165 ESRRBO95718 433 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 CISD3P0C7P0 127 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 GCKP35557 465 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 NNMTP40261 264 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 SLC34A1Q06495 639 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 MAPRE2Q15555 327 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 MYO1HQ8N1T3 1032 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 EFCAB3Q8N7B9 438 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 RSPRY1Q96DX4 576 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 SPATS2LQ9NUQ6 558 aaKnown RBP25.53■■□□□ 1.68
COL13A1-214ENST00000522165 NDE1Q9NXR1 346 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 ZNF225Q9UK10 706 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 ANKRD12Q6UB98 2062 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 PLXNB3Q9ULL4 1909 aa25.53■■□□□ 1.68
COL13A1-214ENST00000522165 ALDOCP09972 364 aaKnown RBP25.52■■□□□ 1.68
COL13A1-214ENST00000522165 PRDX3P30048 256 aaKnown RBP25.52■■□□□ 1.68
COL13A1-214ENST00000522165 DDIASQ8IXT1 998 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 PGAM4Q8N0Y7 254 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 LATS2Q9NRM7 1088 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 POMPQ9Y244 141 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 NUP210Q8TEM1 1887 aaPredicted RBP25.52■■□□□ 1.68
COL13A1-214ENST00000522165 CRCPO75575 148 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 LEFTY1O75610 366 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 ADH5P11766 374 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 DGKGP49619 791 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 RBBP7Q16576 425 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 AGKQ53H12 422 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 TRIM68Q6AZZ1 485 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 PHYKPLQ8IUZ5 450 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 OSCP1Q8WVF1 389 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 ULK4Q96C45 1275 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 CCDC124Q96CT7 223 aaKnown RBP25.52■■□□□ 1.68
COL13A1-214ENST00000522165 SAMD11Q96NU1 681 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 COPS8Q99627 209 aa25.52■■□□□ 1.68
COL13A1-214ENST00000522165 NUSAP1Q9BXS6 441 aaKnown RBP25.52■■□□□ 1.68
COL13A1-214ENST00000522165 VASPP50552 380 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-214ENST00000522165 SESN3P58005 492 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 B4GALNT1Q00973 533 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 ART3Q13508 389 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 PCBP2Q15366 365 aaKnown RBP eCLIP25.51■■□□□ 1.67
COL13A1-214ENST00000522165 ARSIQ5FYB1 569 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 TCEAL5Q5H9L2 206 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 KIAA1958Q8N8K9 716 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 NPAS2Q99743 824 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 MCOLN1Q9GZU1 580 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 BTRCQ9Y297 605 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 IGLV3-16A0A075B6K0 115 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 RAD51BO15315 384 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 FFAR2O15552 330 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 LINC00032P0C843 101 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 CYP2A6P11509 494 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-214ENST00000522165 ZNF30P17039 623 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 VIPR2P41587 438 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 ERFP50548 548 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 ERVK-21P61565 698 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 CDC16Q13042 620 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 ARHGEF7Q14155 803 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 C9orf50Q5SZB4 431 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 TMC5Q6UXY8 1006 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 BNC2Q6ZN30 1099 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-214ENST00000522165 PDPRQ8NCN5 879 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 ZNF382Q96SR6 550 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 FAM126AQ9BYI3 521 aaPredicted RBP25.51■■□□□ 1.67
COL13A1-214ENST00000522165 WDR41Q9HAD4 459 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 PKD2L2Q9NZM6 624 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 CCDC167Q9P0B6 97 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 SLC8A2Q9UPR5 921 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 OARD1Q9Y530 152 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 TIMM22Q9Y584 194 aa25.51■■□□□ 1.67
COL13A1-214ENST00000522165 TNPO3Q9Y5L0 923 aaKnown RBP25.51■■□□□ 1.67
COL13A1-214ENST00000522165 PIKFYVEQ9Y2I7 2098 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms