RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SEC13P55735 322 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 ELF3P78545 371 aaPredicted RBP11.94□□□□□ -0.5
USF1-203ENST00000368021 DLG1Q12959 904 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 MTAPQ13126 283 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
USF1-203ENST00000368021 CCINQ13939 588 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 ACAP2Q15057 778 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 CTSL3PQ5NE16 218 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 LRRC8EQ6NSJ5 796 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 KLC3Q6P597 504 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 CYP2U1Q7Z449 544 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 TRMT11Q7Z4G4 463 aaKnown RBP11.94□□□□□ -0.5
USF1-203ENST00000368021 HSD11B1LQ7Z5J1 315 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 TECPR1Q7Z6L1 1165 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 FSTL5Q8N475 847 aaPredicted RBP11.94□□□□□ -0.5
USF1-203ENST00000368021 TMEM151AQ8N4L1 468 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 HEXDCQ8WVB3 486 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 NXNL1Q96CM4 212 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 ZSCAN5AQ9BUG6 496 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 MECRQ9BV79 373 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 CLPBQ9H078 707 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 FAM83DQ9H4H8 585 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 GNPTGQ9UJJ9 305 aa11.94□□□□□ -0.5
USF1-203ENST00000368021 OAS3Q9Y6K5 1087 aaKnown RBP11.94□□□□□ -0.5
USF1-203ENST00000368021 MUC6Q6W4X9 2439 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 IGLV3-16A0A075B6K0 115 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 TARM1B6A8C7 271 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 G3V2L1 256 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 SYNCRIPO60506 623 aaKnown RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 EDF1O60869 148 aaKnown RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 VPS26AO75436 327 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 ADH1BP00325 375 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 RBP1P09455 135 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 CCDC166P0CW27 439 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 UGT1A6P19224 532 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 COL9A1P20849 921 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 BGNP21810 368 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 UGT1A1P22309 533 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 UGT1A4P22310 534 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 UGT1A3P35503 534 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 UGT1A5P35504 534 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 NSG1P42857 185 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 METAP1P53582 386 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 IRX4P78413 519 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 CREB5Q02930 508 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 GAS6Q14393 721 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 CSHL1Q14406 222 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 ATP13A5Q4VNC0 1218 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 C2orf27AQ580R0 203 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 HENMT1Q5T8I9 393 aaKnown RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 UGT3A1Q6NUS8 523 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 TMEM207Q6UWW9 146 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 CCDC80Q76M96 950 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 PIGWQ7Z7B1 504 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 PIM3Q86V86 326 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 TRAM1L1Q8N609 369 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 SREK1Q8WXA9 508 aaKnown RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 MRPL46Q9H2W6 279 aaKnown RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 RABEP2Q9H5N1 569 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 SPATA6Q9NWH7 488 aaPredicted RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 ZDHHC3Q9NYG2 299 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 PIKFYVEQ9Y2I7 2098 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 PLXNB3Q9ULL4 1909 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 TK2O00142 265 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 DNAJC6O75061 913 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 RPSAP08865 295 aaKnown RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 C7P10643 843 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 IDO1P14902 403 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 GRK2P25098 689 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 TIE1P35590 1138 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 ETV3P41162 512 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 P2RY2P41231 377 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 RANBP1P43487 201 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 PSMD8P48556 350 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 PRKAA2P54646 552 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 MRPS21P82921 87 aaKnown RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 CCDC15Q0P6D6 951 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 STARD3Q14849 445 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 CHI3L2Q15782 390 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 CST6Q15828 149 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 TMEM52BQ4KMG9 183 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 SETMARQ53H47 684 aaPredicted RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 SDE2Q6IQ49 451 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 ZYG11AQ6WRX3 759 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 MACC1Q6ZN28 852 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 RFLNAQ6ZTI6 216 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 Q6ZVL8 140 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 MYLK4Q86YV6 388 aaPredicted RBP11.93□□□□□ -0.5
USF1-203ENST00000368021 C10orf107Q8IVU9 208 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 DTWD2Q8NBA8 298 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 ANKRD49Q8WVL7 239 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 CLDN23Q96B33 292 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 COQ10AQ96MF6 247 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 COPS8Q99627 209 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 SPATA16Q9BXB7 569 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 OSBPL6Q9BZF3 934 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 SLCO1B3Q9NPD5 702 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 C2orf42Q9NWW7 574 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 XPR1Q9UBH6 696 aa11.93□□□□□ -0.5
USF1-203ENST00000368021 E5RI56 91 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms