RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 TRIM10Q9UDY6 481 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 SLC23A2Q9UGH3 650 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 CROTQ9UKG9 612 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 PCDHB3Q9Y5E6 796 aa11.31□□□□□ -0.6
RAB5C-203ENST00000546881 MN1Q10571 1320 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-203ENST00000546881 PRR19A6NJB7 356 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 KIAA0754O94854 1291 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 ANKRD34CP0C6C1 535 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-203ENST00000546881 NR1D1P20393 614 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 F8A1P23610 371 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 RPL10P27635 214 aaKnown RBP11.3□□□□□ -0.6
RAB5C-203ENST00000546881 DRG2P55039 364 aaKnown RBP11.3□□□□□ -0.6
RAB5C-203ENST00000546881 ERV3-1Q14264 604 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 IRGCQ6NXR0 463 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 FAM92BQ6ZTR7 304 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 LRRTM4Q86VH4 590 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 TRAM1L1Q8N609 369 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 SPC24Q8NBT2 197 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-203ENST00000546881 CTNNBL1Q8WYA6 563 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-203ENST00000546881 GLYATL1Q969I3 302 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 EID2BQ96D98 161 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 AGAP3Q96P47 875 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 ZSCAN5AQ9BUG6 496 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 SIDT1Q9NXL6 827 aaKnown RBP11.3□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF624Q9P2J8 865 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-203ENST00000546881 LNPEPQ9UIQ6 1025 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 PLAAQ9Y263 795 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 TP53TG5Q9Y2B4 290 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF711Q9Y462 761 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 SLC30A1Q9Y6M5 507 aa11.3□□□□□ -0.6
RAB5C-203ENST00000546881 LRRD1A4D1F6 860 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 CDC14CA4D256 554 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 GOLGA6L3A6NEY3 463 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 OR52A4PA6NMU1 304 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 KMOO15229 486 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 NDUFA10O95299 355 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 C9P02748 559 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 XRCC1P18887 633 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 KDELR1P24390 212 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 HNRNPH3P31942 346 aaKnown RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 SLC19A1P41440 591 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 CLCNKAP51800 687 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 IFI35P80217 286 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 PPIDQ08752 370 aaKnown RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 TBX2Q13207 712 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 MAP7Q14244 749 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 MESDQ14696 234 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 CACHD1Q5VU97 1274 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 CCDC70Q6NSX1 233 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 B4GALNT4Q76KP1 1039 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 NT5DC3Q86UY8 548 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 CNTD1Q8N815 330 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 GDAP1Q8TB36 358 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 RSC1A1Q92681 617 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 FAF2Q96CS3 445 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 CXorf40BQ96DE9 158 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 RNF157Q96PX1 679 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 MAK16Q9BXY0 300 aaKnown RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 PACSIN1Q9BY11 444 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 TWSG1Q9GZX9 223 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 NHEJ1Q9H9Q4 299 aaPredicted RBP11.29□□□□□ -0.6
RAB5C-203ENST00000546881 UCK1Q9HA47 277 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 BPIFA1Q9NP55 256 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 RAD18Q9NS91 495 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 ADGRG1Q9Y653 693 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
RAB5C-203ENST00000546881 NAV2Q8IVL1 2488 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 SSU72P8A0A1W2PR75 194 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 GPR89AB7ZAQ6 455 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 MKRN2OSH3BPM6 223 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 CDK14O94921 469 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 H2AFZP0C0S5 128 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 GPR89BP0CG08 455 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 IDSP22304 550 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 DCDC1P59894 354 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 DYNLT1P63172 113 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 CDK18Q07002 472 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 KLRB1Q12918 225 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 GTF2H3Q13889 308 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 GPR18Q14330 331 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 SLC18A3Q16572 532 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 NPNTQ6UXI9 565 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 H2AFVQ71UI9 128 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 TMEM135Q86UB9 458 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 TRAPPC5Q8IUR0 188 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 PLD5Q8N7P1 536 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 TEX19Q8NA77 164 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 IMP4Q96G21 291 aaKnown RBP11.28□□□□□ -0.6
RAB5C-203ENST00000546881 ZDHHC12Q96GR4 267 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 TRIB3Q96RU7 358 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 CHP1Q99653 195 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 TIMM29Q9BSF4 260 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF768Q9H5H4 540 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms