RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CCDC13Q8IYE1 715 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 NME8Q8N427 588 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 PARP16Q8N5Y8 322 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 INPP5DQ92835 1189 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 RPL36ALQ969Q0 106 aaKnown RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SPDL1Q96EA4 605 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 MMABQ96EY8 250 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 RMDN2Q96LZ7 410 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CMTM3Q96MX0 182 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLITRK1Q96PX8 696 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ALS2CR12Q96Q35 445 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 PANX2Q96RD6 677 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 GFM1Q96RP9 751 aaKnown RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CTAGE1Q96RT6 745 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 TSC22D3Q99576 134 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 NUDT16L1Q9BRJ7 211 aaKnown RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 MSTO1Q9BUK6 570 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 POLDIP3Q9BY77 421 aaKnown RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ALDH8A1Q9H2A2 487 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 KAT14Q9H8E8 782 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ANKZF1Q9H8Y5 726 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 MAGEE1Q9HCI5 957 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SIRT3Q9NTG7 399 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZNHIT6Q9NWK9 470 aaKnown RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CWC25Q9NXE8 425 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 RABGAP1Q9Y3P9 1069 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 RAI2Q9Y5P3 530 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 KIF13BQ9NQT8 1826 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLIT1O75093 1534 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 AGLP35573 1532 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CHD4Q14839 1912 aa4.5□□□□□ -1.69
HMGB1P16-201ENST00000447155 CD163L1Q9NR16 1453 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 KIF1AQ12756 1690 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 IGLV5-39A0A0G2JS06 123 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 FRMD3A2A2Y4 597 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 YEATS4O95619 227 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 MMP2P08253 660 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 RHOXF2BP0C7M4 288 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM191BP0C7N4 346 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CBSLP0DN79 551 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 RARGP13631 454 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 DESP17661 470 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CHATP28329 748 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 PRKAR2BP31323 418 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 KIF5BP33176 963 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CBSP35520 551 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 PSMB10P40306 273 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 HADHAP40939 763 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 ABCG1P45844 678 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 F2RL1P55085 397 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 VSNL1P62760 191 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CREB5Q02930 508 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 AIMP2Q13155 320 aaKnown RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CUL3Q13618 768 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 ACVR2BQ13705 512 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 PTGR1Q14914 329 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 DRAP1Q14919 205 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 STK38Q15208 465 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 SGO1Q5FBB7 561 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 DCAF12L2Q5VW00 463 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 ALS2CLQ60I27 953 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 NUGGCQ68CJ6 796 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 SPECC1LQ69YQ0 1117 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 DPY19L2P1Q6NXN4 242 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CYB5D1Q6P9G0 228 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 LCTLQ6UWM7 567 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CWC27Q6UX04 472 aaKnown RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 PALB2Q86YC2 1186 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 MB21D2Q8IYB1 491 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 TEX9Q8N6V9 391 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CCDC89Q8N998 374 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 BEST2Q8NFU1 509 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 OR8K1Q8NGG5 319 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 DYDC1Q8WWB3 177 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 TBC1D31Q96DN5 1066 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 FAM120BQ96EK7 910 aaKnown RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 NLRP4Q96MN2 994 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 WDFY2Q96P53 400 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 RHOXF2Q9BQY4 288 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 TRIM4Q9C037 500 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 FTOQ9C0B1 505 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 LSG1Q9H089 658 aaKnown RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 NSRP1Q9H0G5 558 aaKnown RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 ISCUQ9H1K1 167 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 SH2D4AQ9H788 454 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CATSPERBQ9H7T0 1116 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLC40A1Q9NP59 571 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 CYSLTR2Q9NS75 346 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 SRPRBQ9Y5M8 271 aaKnown RBP4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 TSPOAP1O95153 1857 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 ABCC12Q96J65 1359 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 C4AP0C0L4 1744 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 C4BP0C0L5 1744 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 MLH3Q9UHC1 1453 aa4.49□□□□□ -1.69
HMGB1P16-201ENST00000447155 GRIN2DO15399 1336 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 NPHP4O75161 1426 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 NCAPD2Q15021 1401 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 LY6G6EA0A0G2JKS1 128 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 LRRD1A4D1F6 860 aa4.48□□□□□ -1.69
HMGB1P16-201ENST00000447155 AGAP14A8MT82 685 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms