RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HECTD2Q5U5R9 776 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 CWF19L1Q69YN2 538 aaKnown RBP14.56□□□□□ -0.08
CXCL12-201ENST00000343575 TAS2R42Q7RTR8 314 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 CLEC14AQ86T13 490 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 HDDC3Q8N4P3 179 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 GABPB2Q8TAK5 448 aaPredicted RBP14.56□□□□□ -0.08
CXCL12-201ENST00000343575 TCP10LQ8TDR4 215 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 ACMSDQ8TDX5 336 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 RAB7BQ96AH8 199 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 ALKBH8Q96BT7 664 aaKnown RBP14.56□□□□□ -0.08
CXCL12-201ENST00000343575 APOPT1Q96IL0 206 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 SLC13A1Q9BZW2 595 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 ABCG8Q9H221 673 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 P2RY12Q9H244 342 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 FAM83DQ9H4H8 585 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 MLXIPLQ9NP71 852 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 CD93Q9NPY3 652 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 PAPOLBQ9NRJ5 636 aaKnown RBP14.56□□□□□ -0.08
CXCL12-201ENST00000343575 MKS1Q9NXB0 559 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 FADS2P1A8MWK0 482 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 PSMD11O00231 422 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 C6P13671 934 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 SAT1P21673 171 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 NFKBIAP25963 317 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ACRV1P26436 265 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ETV4P43268 484 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 POLD2P49005 469 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 TTPAP49638 278 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 SERPINB8P50452 374 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 PDCD2Q16342 344 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 CRY1Q16526 586 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 HSF5Q4G112 596 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 TMEM207Q6UWW9 146 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 EGFL6Q8IUX8 553 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 NXPE1Q8N323 547 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 GALNT15Q8N3T1 639 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 DTX3LQ8TDB6 740 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 DTD2Q96FN9 168 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ELMO2Q96JJ3 720 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 RIOK2Q9BVS4 552 aaKnown RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 C1QTNF1Q9BXJ1 281 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 FBRSQ9HAH7 460 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ZNF358Q9NW07 568 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 GALPQ9UBC7 116 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 NKX1-2Q9UD57 310 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 MBD1Q9UIS9 605 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 GRID1Q9ULK0 1009 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 VWA7Q9Y334 891 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 PRSS21Q9Y6M0 314 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 A0A096LPK6 155 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 DPPA5A6NC42 116 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 AP1G1O43747 822 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 DNAJC6O75061 913 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 NDUFS3O75489 264 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 RECQL5O94762 991 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 SOD1P00441 154 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 TROVE2P10155 538 aaKnown RBP eCLIP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ITGALP20701 1170 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 FMO4P31512 558 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 CRHR1P34998 444 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 PTDSS1P48651 473 aaKnown RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ADARP55265 1226 aaKnown RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 B4GALNT1Q00973 533 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 POU4F1Q01851 419 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 BIRC2Q13490 618 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ACOX1Q15067 660 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 MUM1Q2TAK8 710 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 GPR33Q49SQ1 333 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 EOGTQ5NDL2 527 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 ZDHHC20Q5W0Z9 365 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 CERS6Q6ZMG9 384 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 PIM3Q86V86 326 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 FUBP1Q96AE4 644 aaKnown RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 SLC7A6OSQ96CW6 309 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 AARSD1Q9BTE6 412 aaKnown RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 FOXQ1Q9C009 403 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 MMADHCQ9H3L0 296 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 LTB4R2Q9NPC1 389 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 FBXL12Q9NXK8 326 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.55□□□□□ -0.08
CXCL12-201ENST00000343575 SCOCQ9UIL1 159 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 EMCNQ9ULC0 261 aa14.55□□□□□ -0.08
CXCL12-201ENST00000343575 TRPM6Q9BX84 2022 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 IGLV3-16A0A075B6K0 115 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 UBA6A0AVT1 1052 aaPredicted RBP14.54□□□□□ -0.08
CXCL12-201ENST00000343575 RGSL1A5PLK6 1076 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 ENO4A6NNW6 628 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 WNT9AO14904 365 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 NVLO15381 856 aaKnown RBP14.54□□□□□ -0.08
CXCL12-201ENST00000343575 CCDC22O60826 627 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 RNASEH2AO75792 299 aaKnown RBP14.54□□□□□ -0.08
CXCL12-201ENST00000343575 GABRG2P18507 467 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 NDUFV2P19404 249 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 FDXRP22570 491 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 PTGER3P43115 390 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 RAB10P61026 200 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 DLG1Q12959 904 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 AARS2Q5JTZ9 985 aaKnown RBP14.54□□□□□ -0.08
CXCL12-201ENST00000343575 CYP2U1Q7Z449 544 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms