RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 DNAJC11Q9NVH1 559 aa16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 SUCOQ9UBS9 1254 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 C9IYK1 514 aa16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 TBX1O43435 398 aa16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 GJA9P57773 515 aa16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 CDK18Q07002 472 aa16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 PPP1R8Q12972 351 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 ALG11Q2TAA5 492 aa16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 CELF3Q5SZQ8 465 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 FOXRED2Q8IWF2 684 aa16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 PIWIL1Q96J94 861 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 LENG8Q96PV6 779 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 CHMP1AQ9HD42 196 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 EVLQ9UI08 416 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-201ENST00000267970 MTHFD1P11586 935 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 MAGEA12P43365 314 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 CLK3P49761 638 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 SIDT2Q8NBJ9 832 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 OR10H5Q8NGA6 315 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 LPIN3Q9BQK8 851 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 EHD1Q9H4M9 534 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 COQ10BQ9H8M1 238 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 LOC100509620A0A075B734 347 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 DSC2Q02487 901 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 CBX2Q14781 532 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 GRM3Q14832 879 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 AGAP2Q99490 1192 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 GRHL1Q9NZI5 618 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 CEP170BQ9Y4F5 1589 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3DA0A087WVF3 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3IA0A087WXS9 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3EA0A087X179 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3KA0A087X1G2 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3FA6NER0 549 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3LB9A6J9 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 XYLBO75191 536 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 RSL1D1O76021 490 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 ABHD2P08910 425 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3HP0C7X1 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 E2F2Q14209 437 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3GQ6DHY5 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3CQ6IPX1 549 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 ASB18Q6ZVZ8 466 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 SLC9A9Q8IVB4 645 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 TBC1D3Q8IZP1 549 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 PSMD10O75832 226 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 PGRP06401 933 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 CXCR2P25025 360 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 ZNF135P52742 658 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 MRPS5P82675 430 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 GBE1Q04446 702 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 ZNF155Q12901 538 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 DHRS1Q96LJ7 313 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 CDK15Q96Q40 435 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 PRPF19Q9UMS4 504 aaKnown RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 AIREO43918 545 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 NUDT17P0C025 328 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 NMBRP28336 390 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 SDC2P34741 201 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 IST1P53990 364 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 ZNF410Q86VK4 478 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 ANKRD52Q8NB46 1076 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 SLC43A3Q8NBI5 491 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 EZH1Q92800 747 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 MFSD3Q96ES6 412 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 YIPF4Q9BSR8 244 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 PCDHAC1Q9H158 963 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 MAGEL2Q9UJ55 1249 aa16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 ZNF214Q9UL59 606 aaPredicted RBP16.68■□□□□ 0.26
TSPAN3-201ENST00000267970 A0A0G2JN53 185 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ARL13AQ5H913 290 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 CCDC120Q96HB5 630 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 C1QTNF7Q9BXJ2 289 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 TUBA8Q9NY65 449 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 KLRG2A4D1S0 409 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 CHP2O43745 196 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 PLIN3O60664 434 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 CBX5P45973 191 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 SMIM11AP58511 58 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 LCN1P1Q5VSP4 162 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ANXA8L1Q5VT79 327 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 C1orf189Q5VU69 101 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ADAMTSL2Q86TH1 951 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 AADATQ8N5Z0 425 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ADCY4Q8NFM4 1077 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 OR10H4Q8NGA5 316 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 GPN1Q9HCN4 374 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ATP6V1G1O75348 118 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 DNTTP04053 509 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ECT2LQ008S8 904 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 DUSP4Q13115 394 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 DPYSQ14117 519 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 TMEM203Q969S6 136 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ALOX15BO15296 676 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 S100A2P29034 98 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 DNASE1L1P49184 302 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms