RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ST3GAL2Q16842 350 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 IYDQ6PHW0 289 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 TMEM220Q6QAJ8 160 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 DET1Q7L5Y6 550 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 ZNF438Q7Z4V0 828 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 C11orf96Q7Z7L8 435 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 SFRP1Q8N474 314 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 ACTRT1Q8TDG2 376 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 GFM1Q96RP9 751 aaKnown RBP17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 NAP1L3Q99457 506 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 C19orf43Q9BQ61 176 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 CCDC86Q9H6F5 360 aaKnown RBP17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 CRLS1Q9UJA2 301 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 ATXN7L1Q9ULK2 861 aaPredicted RBP17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 SLC30A1Q9Y6M5 507 aa17.7■□□□□ 0.42
SNRPA1-201ENST00000254193 TMEM8BA6NDV4 472 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 MROH6A6NGR9 719 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 OR2AG2A6NM03 316 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 POP7O75817 140 aaKnown RBP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 PRSS56P0CW18 603 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 COILP38432 576 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 CDKN1CP49918 316 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 ARSDP51689 593 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 PDX1P52945 283 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 AMZ1Q400G9 498 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 ZRANB3Q5FWF4 1079 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 C4orf22Q6V702 233 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 SNX20Q7Z614 316 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 ZNF761Q86XN6 746 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 STYXQ8WUJ0 223 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 SGF29Q96ES7 293 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 CCDC97Q96F63 343 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 ATXN7L3BQ96GX2 97 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 CDKN2AIPNLQ96HQ2 116 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 TIMM29Q9BSF4 260 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 EIF2B3Q9NR50 452 aaKnown RBP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 SCHIP1Q9P0W5 487 aaPredicted RBP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 AK5Q9Y6K8 562 aa17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNRPA1-201ENST00000254193 PRR19A6NJB7 356 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 AGAP14A8MT82 685 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 D6RAR5 112 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 KRT14P02533 472 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 F3P13726 295 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 SESN2P58004 480 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 GPS1Q13098 491 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 SEPT7Q16181 437 aaKnown RBP17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 CYP1B1Q16678 543 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 SKIDA1Q1XH10 827 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 FNBP1LQ5T0N5 605 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 USP53Q70EK8 1073 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 B3GNT8Q7Z7M8 397 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 NXPE1Q8N323 547 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 BEND7Q8N7W2 519 aaPredicted RBP17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 ULK4Q96C45 1275 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 NXPE2Q96DL1 559 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 DCUN1D1Q96GG9 259 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 FOXP3Q9BZS1 431 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 NRSN2Q9GZP1 204 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 SLC2A6Q9UGQ3 507 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 ZMIZ1Q9ULJ6 1067 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 ENTPD2Q9Y5L3 495 aa17.68■□□□□ 0.42
SNRPA1-201ENST00000254193 IGF2RP11717 2491 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 AKAP13Q12802 2813 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 ASXL3Q9C0F0 2248 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 TCRBV7S3A2A0A539 114 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 HEATR9A2RTY3 570 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 OR51F1A6NGY5 319 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 PDZK1P1A8MUH7 402 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 H7C0S8 307 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 TAF4O00268 1085 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 CES2O00748 559 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 MPOP05164 745 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 VCLP18206 1134 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 PSMA3P25788 255 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 RPL10P27635 214 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 PBLDP30039 288 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 FASLGP48023 281 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 DRG2P55039 364 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 NR1D2Q14995 579 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 RTP5Q14D33 572 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 GPR33Q49SQ1 333 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 NKAIN2Q5VXU1 208 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 CCDC137Q6PK04 289 aaKnown RBP17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 TAS2R42Q7RTR8 314 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 AMZ2Q86W34 360 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 PIANPQ8IYJ0 282 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 ZNF778Q96MU6 729 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 COPS8Q99627 209 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 RDH14Q9HBH5 336 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 KNTC1P50748 2209 aa17.67■□□□□ 0.42
SNRPA1-201ENST00000254193 KIR2DS5A0A0G2JLQ3 304 aa17.66■□□□□ 0.42
SNRPA1-201ENST00000254193 A0A0G2JNG1 304 aa17.66■□□□□ 0.42
SNRPA1-201ENST00000254193 A0A1W2PNU3 283 aaPredicted RBP17.66■□□□□ 0.42
SNRPA1-201ENST00000254193 CCDC162PA2VCL2 907 aa17.66■□□□□ 0.42
SNRPA1-201ENST00000254193 KIR2DS3K7RE56 304 aa17.66■□□□□ 0.42
SNRPA1-201ENST00000254193 SGTAO43765 313 aa17.66■□□□□ 0.42
SNRPA1-201ENST00000254193 PHF2O75151 1096 aa17.66■□□□□ 0.42
SNRPA1-201ENST00000254193 TCP1P17987 556 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms