RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 MCM2P49736 904 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 GTF2A1P52655 376 aaPredicted RBP11.64□□□□□ -0.55
VPS8-225ENST00000492449 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
VPS8-225ENST00000492449 INTS4Q96HW7 963 aaKnown RBP11.64□□□□□ -0.55
VPS8-225ENST00000492449 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 TNNT1P13805 278 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 ZNF518AQ6AHZ1 1483 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 ADAMTS12P58397 1594 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 CASQ1P31415 396 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 NAA30Q147X3 362 aaPredicted RBP11.64□□□□□ -0.55
VPS8-225ENST00000492449 ERO1AQ96HE7 468 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 ZNF446Q9NWS9 450 aa11.64□□□□□ -0.55
VPS8-225ENST00000492449 ABCA6Q8N139 1617 aa11.63□□□□□ -0.55
VPS8-225ENST00000492449 GUCY2CP25092 1073 aa11.63□□□□□ -0.55
VPS8-225ENST00000492449 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
VPS8-225ENST00000492449 SLC26A8Q96RN1 970 aa11.63□□□□□ -0.55
VPS8-225ENST00000492449 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
VPS8-225ENST00000492449 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.63□□□□□ -0.55
VPS8-225ENST00000492449 PIK3R4Q99570 1358 aa11.63□□□□□ -0.55
VPS8-225ENST00000492449 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
VPS8-225ENST00000492449 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
VPS8-225ENST00000492449 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
VPS8-225ENST00000492449 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
VPS8-225ENST00000492449 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
VPS8-225ENST00000492449 SSH1Q8WYL5 1049 aa11.62□□□□□ -0.55
VPS8-225ENST00000492449 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
VPS8-225ENST00000492449 PTPRCP08575 1304 aa11.62□□□□□ -0.55
VPS8-225ENST00000492449 LOC102724159A0A0B4J2E5 919 aa11.62□□□□□ -0.55
VPS8-225ENST00000492449 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
VPS8-225ENST00000492449 H2AFXP16104 143 aaPredicted RBP11.62□□□□□ -0.55
VPS8-225ENST00000492449 PWP2Q15269 919 aaKnown RBP11.62□□□□□ -0.55
VPS8-225ENST00000492449 USP48Q86UV5 1035 aa11.62□□□□□ -0.55
VPS8-225ENST00000492449 PRG4Q92954 1404 aaPredicted RBP11.62□□□□□ -0.55
VPS8-225ENST00000492449 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 ZBTB9Q96C00 473 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 NOB1Q9ULX3 412 aaKnown RBP11.61□□□□□ -0.55
VPS8-225ENST00000492449 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 DHX37Q8IY37 1157 aaKnown RBP11.61□□□□□ -0.55
VPS8-225ENST00000492449 ST7Q9NRC1 585 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 ERBB3P21860 1342 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.61□□□□□ -0.55
VPS8-225ENST00000492449 APPP05067 770 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 TEX35Q5T0J7 233 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.61□□□□□ -0.55
VPS8-225ENST00000492449 C16orf45Q96MC5 204 aaPredicted RBP11.61□□□□□ -0.55
VPS8-225ENST00000492449 RRP7AQ9Y3A4 280 aaKnown RBP11.61□□□□□ -0.55
VPS8-225ENST00000492449 FHOD1Q9Y613 1164 aa11.61□□□□□ -0.55
VPS8-225ENST00000492449 IL16Q14005 1332 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 MYO1CO00159 1063 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 TTC22Q5TAA0 569 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 CHMP4CQ96CF2 233 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 DISP1Q96F81 1524 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 PTGS1P23219 599 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 CEP135Q66GS9 1140 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 TMX3Q96JJ7 454 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
VPS8-225ENST00000492449 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
VPS8-225ENST00000492449 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 ALDH1L2Q3SY69 923 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 SYT10Q6XYQ8 523 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 MAST1Q9Y2H9 1570 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 TUBGCP6Q96RT7 1819 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 UBE2HP62256 183 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 NEUROD2Q15784 382 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 PLEKHM2Q8IWE5 1019 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 IQUBQ8NA54 791 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 UBXN6Q9BZV1 441 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 KCND1Q9NSA2 647 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 ZNF215Q9UL58 517 aaPredicted RBP11.59□□□□□ -0.55
VPS8-225ENST00000492449 RTL1A6NKG5 1358 aa11.59□□□□□ -0.55
VPS8-225ENST00000492449 INO80Q9ULG1 1556 aaPredicted RBP11.59□□□□□ -0.55
VPS8-225ENST00000492449 LMOD3Q0VAK6 560 aa11.58□□□□□ -0.55
VPS8-225ENST00000492449 AATKQ6ZMQ8 1374 aa11.58□□□□□ -0.55
VPS8-225ENST00000492449 IL17RAQ96F46 866 aa11.58□□□□□ -0.55
VPS8-225ENST00000492449 WDR33Q9C0J8 1336 aaKnown RBP11.58□□□□□ -0.55
VPS8-225ENST00000492449 CWC15Q9P013 229 aaKnown RBP11.58□□□□□ -0.55
VPS8-225ENST00000492449 KCNG1Q9UIX4 513 aa11.58□□□□□ -0.55
VPS8-225ENST00000492449 HTATSF1O43719 755 aaKnown RBP11.58□□□□□ -0.56
VPS8-225ENST00000492449 TPM4P67936 248 aa11.58□□□□□ -0.56
VPS8-225ENST00000492449 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
VPS8-225ENST00000492449 CARD14Q9BXL6 1004 aa11.58□□□□□ -0.56
VPS8-225ENST00000492449 PTCH1Q13635 1447 aa11.58□□□□□ -0.56
VPS8-225ENST00000492449 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
VPS8-225ENST00000492449 SMARCA5O60264 1052 aaPredicted RBP11.58□□□□□ -0.56
VPS8-225ENST00000492449 EXOSC9Q06265 439 aaKnown RBP11.58□□□□□ -0.56
VPS8-225ENST00000492449 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
VPS8-225ENST00000492449 V9GYY5 206 aaPredicted RBP11.58□□□□□ -0.56
VPS8-225ENST00000492449 KNDC1Q76NI1 1749 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 CEP120Q8N960 986 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 SPC24Q8NBT2 197 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 ZC3H13Q5T200 1668 aaKnown RBP11.57□□□□□ -0.56
VPS8-225ENST00000492449 ATP8B1O43520 1251 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 ELF2Q15723 593 aa11.57□□□□□ -0.56
VPS8-225ENST00000492449 SRLQ86TD4 932 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms