RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PFDN6O15212 129 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 AP1G1O43747 822 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GMFGO60234 142 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SUSD5O60279 629 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NOS1APO75052 506 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TRIM3O75382 744 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 RPP40O75818 363 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CABYRO75952 493 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 KRT36O76013 467 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CCNB2O95067 398 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SPDEFO95238 335 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 PGLSO95336 258 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 FTCDO95954 541 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 POMCP01189 267 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CRYABP02511 175 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CRYGCP07315 174 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CYC1P08574 325 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 KRT16P08779 473 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 COX5BP10606 129 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GHRP10912 638 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 COMTP21964 271 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 AHCYP23526 432 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HOXA7P31268 230 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HOXA9P31269 272 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HTR7P34969 479 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HMGCLP35914 325 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GP5P40197 560 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TECP42680 631 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 MAGEA1P43355 309 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CASP4P49662 377 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HNRNPFP52597 415 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 STAT2P52630 851 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 OAZ1P54368 228 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 PSMD4P55036 377 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CDH4P55283 916 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GNG2P59768 71 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ECT2LQ008S8 904 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 RAD51Q06609 339 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 DPTQ07507 201 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 C2orf54Q08AI8 447 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GPS1Q13098 491 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 PAK1Q13153 545 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TUSC3Q13454 348 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 THOC5Q13769 683 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TYSND1Q2T9J0 566 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF829Q3KNS6 432 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CTXN3Q4LDR2 81 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TMEM119Q4V9L6 283 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 PAN2Q504Q3 1202 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GPAT3Q53EU6 434 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HES5Q5TA89 166 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ATPAF1Q5TC12 328 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 MAP3K21Q5TCX8 1036 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 C20orf194Q5TEA3 1177 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 KLHDC7AQ5VTJ3 777 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 FAM171A1Q5VUB5 890 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 C1orf146Q5VVC0 180 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 YOD1Q5VVQ6 348 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GARNL3Q5VVW2 1013 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 PLA2G4FQ68DD2 849 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SPOPLQ6IQ16 392 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 RINT1Q6NUQ1 792 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ARMC6Q6NXE6 501 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 C3orf33Q6P1S2 294 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 MTFR2Q6P444 385 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 KLHDC10Q6PID8 442 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 USP17L6PQ6QN14 398 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 VITQ6UXI7 678 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 USP43Q70EL4 1123 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC24A5Q71RS6 500 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HEATR3Q7Z4Q2 680 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GPR141Q7Z602 305 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TAC4Q86UU9 113 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 FAM131BQ86XD5 332 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZFAND4Q86XD8 727 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF575Q86XF7 245 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CCDC28AQ8IWP9 274 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF679Q8IYX0 411 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF781Q8N8C0 355 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SNX31Q8N9S9 440 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CNBD1Q8NA66 436 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 OR6B3Q8NGW1 331 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CHTF18Q8WVB6 975 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GTF3AQ92664 365 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 PRCCQ92733 491 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NTAN1Q96AB6 310 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 GDAP1L1Q96MZ0 367 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 BPIFA3Q9BQP9 254 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TIPINQ9BVW5 301 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SPATA9Q9BWV2 254 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TBC1D10AQ9BXI6 508 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HEMGNQ9BXL5 484 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 HDHD2Q9H0R4 259 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NAPBQ9H115 298 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 BLZF1Q9H2G9 400 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 EXO5Q9H790 373 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TDRD3Q9H7E2 651 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NT5MQ9NPB1 228 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 DMRT3Q9NQL9 472 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms