RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CACNG1Q06432 222 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 ARHGEF7Q14155 803 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 PDK4Q16654 411 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 FAM46CQ5VWP2 391 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 ANO7Q6IWH7 933 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 ERAP2Q6P179 960 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 TMPRSS6Q8IU80 811 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 FAM13CQ8NE31 585 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 DNAJC9Q8WXX5 260 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 COQ10AQ96MF6 247 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 BIRC8Q96P09 236 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 PLEKHG4BQ96PX9 1271 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 SMC6Q96SB8 1091 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 OLFM1Q99784 485 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 WRAP53Q9BUR4 548 aaKnown RBP14.58□□□□□ -0.08
CXCL12-201ENST00000343575 ETAA1Q9NY74 926 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 APPL1Q9UKG1 709 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 SLC39A10Q9ULF5 831 aa14.58□□□□□ -0.08
CXCL12-201ENST00000343575 PLXNA2O75051 1894 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 MAN2B1O00754 1011 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 C5AR1P21730 350 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TARSP26639 723 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 PEX19P40855 299 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TAS2R39P59534 338 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TMEM52BQ4KMG9 183 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 ATP13A5Q4VNC0 1218 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 ZNF776Q68DI1 518 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SDE2Q6IQ49 451 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SNX20Q7Z614 316 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SDCCAG8Q86SQ7 713 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SLC41A1Q8IVJ1 513 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 PELI3Q8N2H9 469 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TCF12Q99081 682 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 YIPF3Q9GZM5 350 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 ASB8Q9H765 288 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 C2orf42Q9NWW7 574 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 THEGQ9P2T0 379 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 WNT16Q9UBV4 365 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TRIM33Q9UPN9 1127 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SLC30A1Q9Y6M5 507 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 DOCK9Q9BZ29 2069 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 A0A1W2PP55 124 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 H0Y858 1186 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 EDF1O60869 148 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 WISP3O95389 354 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 ADH1BP00325 375 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 C2P06681 752 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 ELFN1P0C7U0 828 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TYK2P29597 1187 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SUOXP51687 545 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 CDKN2DP55273 166 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 WDR4P57081 412 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 CREB5Q02930 508 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 GAS6Q14393 721 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 ZNF460Q14592 562 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 DBN1Q16643 649 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SETMARQ53H47 684 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 HENMT1Q5T8I9 393 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 ZNF852Q6ZMS4 543 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TRMT11Q7Z4G4 463 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 LONP2Q86WA8 852 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SERPINA9Q86WD7 417 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 PLD6Q8N2A8 252 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 LRRC8CQ8TDW0 803 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 NAT14Q8WUY8 206 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SCG3Q8WXD2 468 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 MRGPRX1Q96LB2 322 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TRAPPC9Q96Q05 1148 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 CCDC28BQ9BUN5 200 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 BOCQ9BWV1 1114 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 CD320Q9NPF0 282 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 DYRK4Q9NR20 520 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 PCMTD2Q9NV79 361 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 INTS10Q9NVR2 710 aaKnown RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 PKD2L2Q9NZM6 624 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 SLC17A7Q9P2U7 560 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 NFKBIL1Q9UBC1 381 aaPredicted RBP14.57□□□□□ -0.08
CXCL12-201ENST00000343575 MMP17Q9ULZ9 603 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 LRCH1Q9Y2L9 728 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 COQ6Q9Y2Z9 468 aa14.57□□□□□ -0.08
CXCL12-201ENST00000343575 PHGDHO43175 533 aaKnown RBP14.56□□□□□ -0.08
CXCL12-201ENST00000343575 MMP20O60882 483 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 RNASEH1O60930 286 aaKnown RBP14.56□□□□□ -0.08
CXCL12-201ENST00000343575 SMIM24O75264 130 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 SLC35E2BP0CK96 405 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 PMLP29590 882 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 VHLP40337 213 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 CLCN5P51795 746 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 STARD6P59095 220 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 DCDC1P59894 354 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 IRF9Q00978 393 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 OCRLQ01968 901 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 PRKCQQ04759 706 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 ELP6Q0PNE2 266 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 USP10Q14694 798 aaKnown RBP14.56□□□□□ -0.08
CXCL12-201ENST00000343575 STARD3Q14849 445 aa14.56□□□□□ -0.08
CXCL12-201ENST00000343575 CTSL3PQ5NE16 218 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms