RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MCM2P49736 904 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 PNLIPRP1P54315 467 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 CLDN2P57739 230 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 SP3Q02447 781 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 FOXM1Q08050 763 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 ACVR2BQ13705 512 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 STARD3Q14849 445 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 SMAD1Q15797 465 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 PFKFB4Q16877 469 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 C2orf68Q2NKX9 166 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 RNF212Q495C1 297 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 GTDC1Q4AE62 458 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 ASPRV1Q53RT3 343 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 C2CD6Q53TS8 623 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 SGO1Q5FBB7 561 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 KHDRBS2Q5VWX1 349 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 GGNBP1Q5YKI7 109 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 GGT6Q6P531 493 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 RAD9BQ6WBX8 426 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 SLC46A3Q7Z3Q1 461 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 C11orf96Q7Z7L8 435 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 NOXA1Q86UR1 476 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 GPR180Q86V85 440 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 HPS6Q86YV9 775 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 TICAM1Q8IUC6 712 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 MAP7D3Q8IWC1 876 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 ADSSL1Q8N142 457 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 PARP8Q8N3A8 854 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 LINS1Q8NG48 757 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 RDM1Q8NG50 284 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 OR6Y1Q8NGX8 325 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 OR5R1Q8NH85 324 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 GTF3AQ92664 365 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 GOLGA1Q92805 767 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 TSR2Q969E8 191 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 RFT1Q96AA3 541 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 GIMAP5Q96F15 307 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 RBM17Q96I25 401 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 MAGED4Q96JG8 741 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 CCDC138Q96M89 665 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 PSD2Q9BQI7 771 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 RTP3Q9BQQ7 232 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 RPP25Q9BUL9 199 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 SARGQ9BW04 601 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 LAT2Q9GZY6 243 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 SLC32A1Q9H598 525 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 TAF1DQ9H5J8 278 aaPredicted RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 VEZTQ9HBM0 779 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 SIX2Q9NPC8 291 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 DDX4Q9NQI0 724 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 EPHA6Q9UF33 1036 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 LRWD1Q9UFC0 647 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 FBXO9Q9UK97 447 aaPredicted RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 SUFUQ9UMX1 484 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 CARD8Q9Y2G2 431 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 KLHL20Q9Y2M5 609 aa0.71□□□□□ -2.3
COPB1-212ENST00000534771 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.71□□□□□ -2.36e-6■■□□□ 13.9
COPB1-212ENST00000534771 PRRC2AP48634 2157 aaKnown RBP0.71□□□□□ -2.3
COPB1-212ENST00000534771 IGHV4-4A0A075B6R2 117 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 ANKRD62A6NC57 917 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 PABPN1LA6NDY0 278 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 LGALS16A8MUM7 142 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TEX22C9J3V5 150 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 H0Y3Z8 333 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TNPO2O14787 897 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 PHOX2AO14813 284 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 SPINT2O43291 252 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 ANP32CO43423 234 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 PDE9AO76083 593 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 NADKO95544 446 aaPredicted RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 DUS4LO95620 317 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 IGHV3-13P01766 116 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 S100BP04271 92 aaPredicted RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 TFAP2AP05549 437 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 ATF3P18847 181 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 ABCB4P21439 1286 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 UGT1A4P22310 534 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 DRD3P35462 400 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 WNT5AP41221 380 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TECP42680 631 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 FASLGP48023 281 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TM4SF4P48230 202 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 HNRNPA3P51991 378 aaKnown RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 CSNK2A1P68400 391 aaPredicted RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 COG7P83436 770 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 MBTD1Q05BQ5 628 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 GRIK3Q13003 919 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 GRAPQ13588 217 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 RFTN1Q14699 578 aaPredicted RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 VEPH1Q14D04 833 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 NECTIN1Q15223 517 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TAF11Q15544 211 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TEAD2Q15562 447 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 TCTN1Q2MV58 587 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 SYCP2LQ5T4T6 812 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 SEL1L3Q68CR1 1132 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 LRRC8EQ6NSJ5 796 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 DENND1BQ6P3S1 775 aa0.7□□□□□ -2.3
COPB1-212ENST00000534771 FBXO46Q6PJ61 603 aaPredicted RBP0.7□□□□□ -2.3
COPB1-212ENST00000534771 IGFL3Q6UXB1 125 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms