RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 CTAGE9A4FU28 777 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 NEMP2A6NFY4 417 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 C2orf81A6NN90 581 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 LMO7DNF2Z398 122 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 GAPDHSO14556 408 aaPredicted RBP13.26□□□□□ -0.29
VPS28-210ENST00000529182 STX7O15400 261 aaKnown RBP13.26□□□□□ -0.29
VPS28-210ENST00000529182 PSMD3O43242 534 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 TNFSF14O43557 240 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A9O60656 530 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 APRTP07741 180 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 ANXA6P08133 673 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 ALPPL2P10696 532 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A6P19224 532 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 LPOP22079 712 aaPredicted RBP13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A1P22309 533 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A4P22310 534 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A3P35503 534 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A5P35504 534 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 BASP1P80723 227 aaKnown RBP13.26□□□□□ -0.29
VPS28-210ENST00000529182 TMPRSS15P98073 1019 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 SEPT6Q14141 434 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 POU6F1Q14863 301 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 ELOCQ15369 112 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 CHRNA6Q15825 494 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 CYP1B1Q16678 543 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 ATP13A5Q4VNC0 1218 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 CCDC137Q6PK04 289 aaKnown RBP13.26□□□□□ -0.29
VPS28-210ENST00000529182 ERMP1Q7Z2K6 904 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 GLRX5Q86SX6 157 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 OR4K2Q8NGD2 314 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 APOLD1Q96LR9 279 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 TBATAQ96M53 351 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 PLEKHG4BQ96PX9 1271 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 CDH19Q9H159 772 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A7Q9HAW7 530 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A10Q9HAW8 530 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 UGT1A8Q9HAW9 530 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 FKBPLQ9UIM3 349 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 PRKAB1Q9Y478 270 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 SAR1BQ9Y6B6 198 aa13.26□□□□□ -0.29
VPS28-210ENST00000529182 LY6G6EA0A0G2JKS1 128 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 GLYATL1P3A0A0U1RQE8 302 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 CCDC78A2IDD5 438 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 ERI2A8K979 691 aaKnown RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 CCL22O00626 93 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 LDB2O43679 373 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 DNAJC6O75061 913 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 PHF2O75151 1096 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 MTX2O75431 263 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 SUN1O94901 812 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 SLC25A14O95258 325 aaPredicted RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 CRTAMO95727 393 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 TOP3BO95985 862 aaKnown RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 KRT14P02533 472 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 IVLP07476 585 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 AK4P27144 223 aaPredicted RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 ZNF140P52738 457 aaPredicted RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 KHDC1Q4VXA5 237 aaKnown RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 CCDC38Q502W7 563 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 HS1BP3Q53T59 392 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 CERCAMQ5T4B2 595 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 PPP1R21Q6ZMI0 780 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 TAF8Q7Z7C8 310 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 LINC00523Q86TU6 105 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 NRROSQ86YC3 692 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 CREG2Q8IUH2 290 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 SFTPA2Q8IWL1 248 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 FSTL5Q8N475 847 aaPredicted RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 DNAAF3Q8N9W5 541 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 GLYATL1Q969I3 302 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 DNAJC1Q96KC8 554 aaKnown RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 DUSP23Q9BVJ7 150 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 ATXN10Q9UBB4 475 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 FEZ2Q9UHY8 353 aaPredicted RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 DOLKQ9UPQ8 538 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 GPSM3Q9Y4H4 160 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 ST14Q9Y5Y6 855 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 U3KQA8 63 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
VPS28-210ENST00000529182 CEP295Q9C0D2 2601 aa13.25□□□□□ -0.29
VPS28-210ENST00000529182 GOLGA4Q13439 2230 aaKnown RBP13.24□□□□□ -0.29
VPS28-210ENST00000529182 MYLKQ15746 1914 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 TCRBV7S3A2A0A539 114 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 TPP1O14773 563 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 ADRB1P08588 477 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 ZNF8P17098 575 aaPredicted RBP13.24□□□□□ -0.29
VPS28-210ENST00000529182 ADCY8P40145 1251 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 ACADVLP49748 655 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 DAB2P98082 770 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 CDH17Q12864 832 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 FOXC1Q12948 553 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 GPS1Q13098 491 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 PYCR3Q53H96 274 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 ZDHHC20Q5W0Z9 365 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 PDPK2PQ6A1A2 396 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 ADGRG6Q86SQ4 1221 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 GKN2Q86XP6 184 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 GALNT13Q8IUC8 556 aa13.24□□□□□ -0.29
VPS28-210ENST00000529182 PHYKPLQ8IUZ5 450 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms