RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 CLPBQ9H078 707 aa13.49□□□□□ -0.25
FDPS-219ENST00000495308 CDH19Q9H159 772 aa13.49□□□□□ -0.25
FDPS-219ENST00000495308 CARS2Q9HA77 564 aaKnown RBP13.49□□□□□ -0.25
FDPS-219ENST00000495308 IL26Q9NPH9 171 aa13.49□□□□□ -0.25
FDPS-219ENST00000495308 SPASTQ9UBP0 616 aa13.49□□□□□ -0.25
FDPS-219ENST00000495308 FEZ2Q9UHY8 353 aaPredicted RBP13.49□□□□□ -0.25
FDPS-219ENST00000495308 FKBPLQ9UIM3 349 aa13.49□□□□□ -0.25
FDPS-219ENST00000495308 SUFUQ9UMX1 484 aa13.49□□□□□ -0.25
FDPS-219ENST00000495308 ARHGEF17Q96PE2 2063 aaPredicted RBP13.49□□□□□ -0.25
FDPS-219ENST00000495308 ASPMQ8IZT6 3477 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 GLYATL1P3A0A0U1RQE8 302 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 TCRBV7S3A2A0A539 114 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 CCDC78A2IDD5 438 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 C2orf81A6NN90 581 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 TRIM38O00635 465 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 GAPDHSO14556 408 aaPredicted RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 TNFRSF10CO14798 259 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 LDB2O43679 373 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 ASMTLO95671 621 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 CRTAMO95727 393 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 CA5AP35218 305 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 GNPDA1P46926 289 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 BLKP51451 505 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 ZNF140P52738 457 aaPredicted RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 CDH17Q12864 832 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 TRIP6Q15654 476 aaKnown RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 CHRNA6Q15825 494 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 ATP13A5Q4VNC0 1218 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 CCDC38Q502W7 563 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 CERCAMQ5T4B2 595 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 ZNF648Q5T619 568 aaPredicted RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 OR4C6Q8NH72 309 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 CNDP2Q96KP4 475 aaKnown RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 TMEM168Q9H0V1 697 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 FTSJ1Q9UET6 329 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 TMPRSS11EQ9UL52 423 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 SLC17A4Q9Y2C5 497 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 NEU2Q9Y3R4 380 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 PCYT1BQ9Y5K3 369 aaPredicted RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 DGKBQ9Y6T7 804 aa13.48□□□□□ -0.25
FDPS-219ENST00000495308 GOLGA4Q13439 2230 aaKnown RBP13.48□□□□□ -0.25
FDPS-219ENST00000495308 SIGLEC6O43699 453 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A9O60656 530 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 PPFIA2O75334 1257 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 MTX2O75431 263 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 SLC25A14O95258 325 aaPredicted RBP13.47□□□□□ -0.25
FDPS-219ENST00000495308 ECEL1O95672 775 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 LDOC1O95751 146 aaPredicted RBP13.47□□□□□ -0.25
FDPS-219ENST00000495308 IVLP07476 585 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 MYF5P13349 255 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A6P19224 532 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A1P22309 533 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A4P22310 534 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A3P35503 534 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A5P35504 534 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 PAFAH1B1P43034 410 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 KCNJ11Q14654 390 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 ANKRD22Q5VYY1 191 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 PHYKPLQ8IUZ5 450 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 KLHL7Q8IXQ5 586 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 CCL4L1Q8NHW4 92 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 GRK7Q8WTQ7 553 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 GLYATL1Q969I3 302 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 DNAJC1Q96KC8 554 aaKnown RBP13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A7Q9HAW7 530 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A10Q9HAW8 530 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 UGT1A8Q9HAW9 530 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 CASS4Q9NQ75 786 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 EIF2B3Q9NR50 452 aaKnown RBP13.47□□□□□ -0.25
FDPS-219ENST00000495308 NLGN3Q9NZ94 848 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 PRKAB1Q9Y478 270 aa13.47□□□□□ -0.25
FDPS-219ENST00000495308 PTPRBP23467 1997 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 NEMP2A6NFY4 417 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 LMO7DNF2Z398 122 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 PRAMEF1O95521 474 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 GAS8O95995 478 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 ALPPL2P10696 532 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 TPSB2P20231 275 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 SESN2P58004 480 aaPredicted RBP13.46□□□□□ -0.25
FDPS-219ENST00000495308 SIM1P81133 766 aaPredicted RBP13.46□□□□□ -0.25
FDPS-219ENST00000495308 PDE1BQ01064 536 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 ELOCQ15369 112 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 PPP1R7Q15435 360 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 TPSAB1Q15661 275 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 KHDC1Q4VXA5 237 aaKnown RBP13.46□□□□□ -0.25
FDPS-219ENST00000495308 HS1BP3Q53T59 392 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 ZDHHC20Q5W0Z9 365 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 ZNF534Q76KX8 674 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 FSTL5Q8N475 847 aaPredicted RBP13.46□□□□□ -0.25
FDPS-219ENST00000495308 GDAP1Q8TB36 358 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 TBATAQ96M53 351 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 VPS35Q96QK1 796 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 CDC6Q99741 560 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 OR2AG1Q9H205 316 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 ATXN10Q9UBB4 475 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 DOLKQ9UPQ8 538 aa13.46□□□□□ -0.25
FDPS-219ENST00000495308 PLEKHM1Q9Y4G2 1056 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms