RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IYDQ6PHW0 289 aa13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 ZNF517Q6ZMY9 492 aaPredicted RBP13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 CBARPQ8N350 705 aaPredicted RBP13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 CFAP57Q96MR6 1250 aa13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 B4GALT6Q9UBX8 382 aa13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 FARSAQ9Y285 508 aaKnown RBP13.74□□□□□ -0.21
NKX3-1-202ENST00000523261 TRIM49BA6NDI0 452 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 LILRA5A6NI73 299 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 F5H423 210 aaPredicted RBP13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 E2F3O00716 465 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 SNRPB2P08579 225 aaKnown RBP13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 ADRA1BP35368 520 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 RGRP47804 291 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 RAPSNQ13702 412 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 LRP8Q14114 963 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 CNGA3Q16281 694 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 RAB6CQ53S08 254 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 FAM102AQ5T9C2 384 aaPredicted RBP13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 VWA5B1Q5TIE3 1220 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 PWWP2BQ6NUJ5 590 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 KCNMB4Q86W47 210 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 TBC1D31Q96DN5 1066 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 DTD2Q96FN9 168 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 ILKAPQ9H0C8 392 aaPredicted RBP13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 RAB6CQ9H0N0 254 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 AGPAT4Q9NRZ5 378 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 KCTD5Q9NXV2 234 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 TBC1D29Q9UFV1 150 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 TMEM98Q9Y2Y6 226 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 PCDHGA10Q9Y5H3 936 aa13.73□□□□□ -0.21
NKX3-1-202ENST00000523261 BPIP17213 487 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 CMA1P23946 247 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 ETV3P41162 512 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 CSNK1DP48730 415 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 POLR2LP62875 67 aaKnown RBP13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 RAET1GQ6H3X3 334 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 MARK2Q7KZI7 788 aaKnown RBP13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 SRLQ86TD4 932 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 SLC9B2Q86UD5 537 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 FJX1Q86VR8 437 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 ZNF295-AS1Q8N0V1 137 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 TMEM102Q8N9M5 508 aaPredicted RBP13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 FNIP1Q8TF40 1166 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 TGM7Q96PF1 710 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 PDFQ9HBH1 243 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 UBA2Q9UBT2 640 aaPredicted RBP13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 CNOT8Q9UFF9 292 aaKnown RBP13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 RCOR1Q9UKL0 485 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 MYO7BQ6PIF6 2116 aa13.72□□□□□ -0.21
NKX3-1-202ENST00000523261 A0A1B0GUH1 482 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 GOLGA6CA6NDK9 693 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 GOLGA6BA6NDN3 693 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 PPP1R3GB7ZBB8 358 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 TRAFD1O14545 582 aaPredicted RBP13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 RASSF9O75901 435 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 GOLGA6DP0CG33 693 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 COX6B1P14854 86 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 USP8P40818 1118 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 SYKP43405 635 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 GLRBP48167 497 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 YBEYP58557 167 aaPredicted RBP13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 KRTAP10-9P60411 292 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 LRRC63Q05C16 580 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 IGFL3Q6UXB1 125 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 MED25Q71SY5 747 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 PRSS42Q7Z5A4 293 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 HSD11B1LQ7Z5J1 315 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 CDH24Q86UP0 819 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 GALNT13Q8IUC8 556 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 KLHL6Q8WZ60 621 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 FCRL4Q96PJ5 515 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 PLCB1Q9NQ66 1216 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 GOLGA6AQ9NYA3 693 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 CPNE7Q9UBL6 633 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 TMEM59LQ9UK28 342 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 PCYT1BQ9Y5K3 369 aaPredicted RBP13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 FER1L5A0AVI2 2057 aa13.71□□□□□ -0.21
NKX3-1-202ENST00000523261 PIKFYVEQ9Y2I7 2098 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 KIR2DS5A0A0G2JLQ3 304 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 A0A0G2JNG1 304 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 KIR2DS3K7RE56 304 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 KIF1CO43896 1103 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 PRICKLE3O43900 615 aaPredicted RBP13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 SOD1P00441 154 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 STSP08842 583 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 TYRP1P17643 537 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 NELFEP18615 380 aaKnown RBP13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 GABRB2P47870 512 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 NDUFA8P51970 172 aa13.7□□□□□ -0.22
NKX3-1-202ENST00000523261 VAV2P52735 878 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 367.7 ms