RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 C1orf226A1L170 272 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 SMIM30A4D0T7 59 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 TMEM200CA6NKL6 621 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 FAM86B1E9PN63 330 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 PPP6CO00743 305 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 ATP2A1O14983 1001 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 SMAD9O15198 467 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 SLC25A17O43808 307 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 RSL1D1O76021 490 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 LETM1O95202 739 aaPredicted RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 HEXBP07686 556 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 FAM86B2P0C5J1 330 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 NR2F6P10588 404 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 CYP2D6P10635 497 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 PFKFB1P16118 471 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 CD27P26842 260 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 PCGF2P35227 344 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 KCNJ1P48048 391 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 SLC26A5P58743 744 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 HNRNPKP61978 463 aaKnown RBP eCLIP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 LARS2Q15031 903 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 PROSER3Q2NL68 480 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 SYTL3Q4VX76 610 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 KLHL26Q53HC5 615 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 ZNF385BQ569K4 471 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 SHEQ5VZ18 495 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 LAIR1Q6GTX8 287 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 DHRS13Q6UX07 377 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 KCTD9Q7L273 389 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 TFAP2DQ7Z6R9 452 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 TBC1D21Q8IYX1 336 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 ANKRD20A12PQ8NF67 263 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 GJC3Q8NFK1 279 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 OR8K5Q8NH50 307 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 CEP76Q8TAP6 659 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 DNASE1L2Q92874 299 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 LENG9Q96B70 501 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 SPACA9Q96E40 222 aaPredicted RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 FBXL20Q96IG2 436 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 FAM118BQ9BPY3 351 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 KRT23Q9C075 422 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 CIPCQ9C0C6 399 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 WDR6Q9NNW5 1121 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 CD320Q9NPF0 282 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 DDX4Q9NQI0 724 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 ZBTB40Q9NUA8 1239 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 LARSQ9P2J5 1176 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 CPSF3Q9UKF6 684 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 DUSP12Q9UNI6 340 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 RPH3AQ9Y2J0 694 aaPredicted RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 RRP15Q9Y3B9 282 aaKnown RBP5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 TEX264Q9Y6I9 313 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 A3GALT2U3KPV4 340 aa5.29□□□□□ -1.56
TM9SF3-202ENST00000443638 CXorf65A6NEN9 183 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 SLC9B1P1A6NJY1 282 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 MPPED1O15442 326 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 AKAP3O75969 853 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ZWINTO95229 277 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ETFAP13804 333 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 AKR1A1P14550 325 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 KCNA5P22460 613 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 NR4A1P22736 598 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 RABIFP47224 123 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ZNF132P52740 706 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 EEFSECP57772 596 aaKnown RBP5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 TP53BP2Q13625 1128 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 VMACQ2NL98 169 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 KIAA1755Q5JYT7 1200 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 C12orf60Q5U649 245 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ZCCHC12Q6PEW1 402 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 FAM198BQ6UWH4 519 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 TRIM72Q6ZMU5 477 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 DCDC5Q6ZRR9 648 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 DPPA4Q7L190 304 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 PPP1R42Q7Z4L9 355 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 RASAL3Q86YV0 1011 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 KLHL7Q8IXQ5 586 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ZCCHC9Q8N567 271 aaKnown RBP5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ROBO4Q8WZ75 1007 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 SYAP1Q96A49 352 aaPredicted RBP5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 SPSB1Q96BD6 273 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 FBXL8Q96CD0 374 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 MYEOVQ96EZ4 313 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ACOX2Q99424 681 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ABCG8Q9H221 673 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 HIPK3Q9H422 1215 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 SLC28A3Q9HAS3 691 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 TSPYL4Q9UJ04 414 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 TNFSF13BQ9Y275 285 aa5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
TM9SF3-202ENST00000443638 A0A0B4J293 547 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 H3BQ06 376 aaPredicted RBP5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 TRIM77I1YAP6 450 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 RRHO14718 337 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 MSI1O43347 362 aaKnown RBP5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 TRIM16O95361 564 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ALPPP05187 535 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 CD63P08962 238 aa5.27□□□□□ -1.57
TM9SF3-202ENST00000443638 ALPPL2P10696 532 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms