RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 SLC22A15Q8IZD6 547 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 CPSF7Q8N684 471 aaKnown RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ZC3H15Q8WU90 426 aaKnown RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 NPLQ9BXD5 320 aaPredicted RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 TUBB1Q9H4B7 451 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 RPF2Q9H7B2 306 aaKnown RBP16.69■□□□□ 0.26
SIPA1-201ENST00000394224 CD274Q9NZQ7 290 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 POLG2Q9UHN1 485 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 ZNHIT2Q9UHR6 403 aa16.69■□□□□ 0.26
SIPA1-201ENST00000394224 CCDC154A6NI56 674 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 TRIM24O15164 1050 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 AP1G1O43747 822 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 OR1I1O60431 355 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 SLC25A27O95847 323 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 BCL10O95999 233 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 GOT2P00505 430 aaKnown RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 FUCA1P04066 466 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 NKX2-5P52952 324 aaPredicted RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 SELPLGQ14242 412 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 ZBTB6Q15916 424 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 TRIM16LQ309B1 348 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 MARC1Q5VT66 337 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 TAS2R42Q7RTR8 314 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 BNIPLQ7Z465 357 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 RPRD1AQ96P16 312 aaPredicted RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 SLC2A11Q9BYW1 496 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 AMBNQ9NP70 447 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 LIMD1Q9UGP4 676 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 LDLRP01130 860 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 TCF3P15923 654 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 SIM2Q14190 667 aaPredicted RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 ERO1BQ86YB8 467 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 VPS51Q9UID3 782 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 RGPD3A6NKT7 1758 aaPredicted RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 RGPD4Q7Z3J3 1758 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 MYO1GB0I1T2 1018 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 HS6ST1O60243 411 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 TLR5O60602 858 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 OR4F21O95013 312 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 ACVRL1P37023 503 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 COL9A2Q14055 689 aaPredicted RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 IHHQ14623 411 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 ZNF678Q5SXM1 525 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 LZTR1Q8N653 840 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 OR6K2Q8NGY2 324 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 PPTC7Q8NI37 304 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 SKA2Q8WVK7 121 aaPredicted RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 HERC2P3Q9BVR0 1158 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 ADAMTS10Q9H324 1103 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 CIDEBQ9UHD4 219 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 EIF2B4Q9UI10 523 aaKnown RBP16.68■□□□□ 0.26
SIPA1-201ENST00000394224 SH3GLB1Q9Y371 365 aa16.68■□□□□ 0.26
SIPA1-201ENST00000394224 A0A1W2PQH9 124 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 GPR32O75388 356 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 ABCB1P08183 1280 aaPredicted RBP16.67■□□□□ 0.26
SIPA1-201ENST00000394224 GDF5P43026 501 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 GEMP55040 296 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 CASP9P55211 416 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 SEMA3AQ14563 771 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 ABRAXAS1Q6UWZ7 409 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 PHACTR4Q8IZ21 702 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 FBXO39Q8N4B4 442 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 GPRC5AQ8NFJ5 357 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 SLC10A4Q96EP9 437 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 GPATCH1Q9BRR8 931 aaKnown RBP16.67■□□□□ 0.26
SIPA1-201ENST00000394224 ZNF385DQ9H6B1 395 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 NMUR1Q9HB89 426 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 SLC38A7Q9NVC3 462 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 HACD3Q9P035 362 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 PCDH10Q9P2E7 1040 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.67■□□□□ 0.26
SIPA1-201ENST00000394224 ZNF510Q9Y2H8 683 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 ARVCFO00192 962 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 B3GALT4O96024 378 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 HMOX2P30519 316 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 SHMT2P34897 504 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 GTF2H3Q13889 308 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 FAM187BQ17R55 369 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 CLYBLQ8N0X4 340 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 PELI3Q8N2H9 469 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 OR52B6Q8NGF0 335 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 PHIPQ8WWQ0 1821 aa16.67■□□□□ 0.26
SIPA1-201ENST00000394224 CCDC162PA2VCL2 907 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 THP07101 528 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 RBP1P09455 135 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 TMED10P49755 219 aaKnown RBP16.66■□□□□ 0.26
SIPA1-201ENST00000394224 SEPHS1P49903 392 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 KPNA2P52292 529 aaKnown RBP16.66■□□□□ 0.26
SIPA1-201ENST00000394224 POU4F1Q01851 419 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 GLYATQ6IB77 296 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 ARHGAP12Q8IWW6 846 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 GLT1D1Q96MS3 346 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 PPP1R10Q96QC0 940 aaKnown RBP16.66■□□□□ 0.26
SIPA1-201ENST00000394224 RASSF1Q9NS23 344 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 SMPD3Q9NY59 655 aaPredicted RBP16.66■□□□□ 0.26
SIPA1-201ENST00000394224 TMEM181Q9P2C4 612 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 ANAPC2Q9UJX6 822 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 IKZF3Q9UKT9 509 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 DLGAP1O14490 977 aa16.66■□□□□ 0.26
SIPA1-201ENST00000394224 NCAM2O15394 837 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms