RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 POMPQ9Y244 141 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 LAMA4Q16363 1823 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 A0A087X1B8 175 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 CCL16O15467 120 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 MGRN1O60291 552 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 GCATO75600 419 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 ANXA5P08758 320 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 OR56A5P0C7T3 313 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 XRCC1P18887 633 aaPredicted RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TACR2P21452 398 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 ALDH4A1P30038 563 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TMED10P49755 219 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 RUNX1T1Q06455 604 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 CBX2Q14781 532 aaPredicted RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 LACTB2Q53H82 288 aaPredicted RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 XKR6Q5GH73 641 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 IL23RQ5VWK5 629 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 ARMC3Q5W041 872 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 RAET1GQ6H3X3 334 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 FAM45BPQ6NSW5 357 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 PAQR3Q6TCH7 311 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 SERPINA13PQ6UXR4 307 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 FRMD7Q6ZUT3 714 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 PATL1Q86TB9 770 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 FLCNQ8NFG4 579 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 FAM45AQ8TCE6 357 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 KLK6Q92876 244 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 PANX1Q96RD7 426 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TMEM109Q9BVC6 243 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 EBPLQ9BY08 206 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 S100A14Q9HCY8 104 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 C15orf38-AP3S2A0A0A6YYH1 394 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 PIP5K1BO14986 540 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 HOXA2O43364 376 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 CLIC3O95833 236 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 BCL10O95999 233 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 STATHP02808 62 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TPSB2P20231 275 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 CYP4F8P98187 520 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF252P-AS1Q0IIN9 211 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TPSAB1Q15661 275 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 INSCQ1MX18 579 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TMEM26Q6ZUK4 368 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 GPRIN1Q7Z2K8 1008 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 ARPINQ7Z6K5 226 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TREML1Q86YW5 311 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 RAB42Q8N4Z0 105 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 RP9Q8TA86 221 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 TPK1Q9H3S4 243 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 SPG21Q9NZD8 308 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 GTF2IRD1Q9UHL9 959 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 PSMD13Q9UNM6 376 aa9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 MRPS23Q9Y3D9 190 aaKnown RBP9.08□□□□□ -0.96
SMARCA1-202ENST00000371122 CDK5RAP2Q96SN8 1893 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 SCN4AP35499 1836 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CCDC162PA2VCL2 907 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 ANKDD1BA6NHY2 528 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TRIM38O00635 465 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 BIRC5O15392 142 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 LDB2O43679 373 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CXCL14O95715 111 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 PKMP14618 531 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 VCLP18206 1134 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CDH15P55291 814 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 MTPNP58546 118 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 PRKCQQ04759 706 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TP53BP2Q13625 1128 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 DPYSL2Q16555 572 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 UAP1L1Q3KQV9 507 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 USP41Q3LFD5 358 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TXNDC8Q6A555 127 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 FBXL22Q6P050 247 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 FUT10Q6P4F1 479 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 C14orf80Q86SX3 495 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TMEM110Q86TL2 294 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF280BQ86YH2 543 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.07□□□□□ -0.962e-7■■■□□ 15
SMARCA1-202ENST00000371122 CBR4Q8N4T8 237 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TWIST2Q8WVJ9 160 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 KAT2AQ92830 837 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 C19orf60Q96EN9 201 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 BTN2A3PQ96KV6 586 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 C12orf42Q96LP6 360 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF558Q96NG5 402 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 KCNA7Q96RP8 456 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 SMG9Q9H0W8 520 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CXCL16Q9H2A7 254 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 STN1Q9H668 368 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CRTAC1Q9NQ79 661 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TMCC3Q9ULS5 477 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CST1P01037 141 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 OCM2P0CE71 109 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 OCMP0CE72 109 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 POU2F1P14859 743 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 POLR2EP19388 210 aaKnown RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 SERPINB10P48595 397 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 CCNHP51946 323 aaPredicted RBP9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 GNA12Q03113 381 aa9.07□□□□□ -0.96
SMARCA1-202ENST00000371122 TRIM32Q13049 653 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms