RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SPINT3P49223 89 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 LIMK2P53671 638 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 MPP1Q00013 466 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 CTBP1Q13363 440 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 ARHGEF7Q14155 803 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 LRRC32Q14392 662 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 AGBL4Q5VU57 503 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 ZDHHC20Q5W0Z9 365 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 TMEM92Q6UXU6 159 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 LIPIQ6XZB0 460 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 TIFABQ6ZNK6 161 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 TECPR1Q7Z6L1 1165 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 EXOC3L1Q86VI1 746 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 ZC3HC1Q86WB0 502 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 GPR26Q8NDV2 337 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 DTX3LQ8TDB6 740 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 SHDQ96IW2 340 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 MKRN2Q9H000 416 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 RHOJQ9H4E5 214 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 IL26Q9NPH9 171 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 DYRK4Q9NR20 520 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 CATSPERZQ9NTU4 200 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 BCCIPQ9P287 314 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 APPL1Q9UKG1 709 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 ITM2BQ9Y287 266 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 MRPS17Q9Y2R5 130 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 FADS3Q9Y5Q0 445 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 ACTL7BQ9Y614 415 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 KANSL1LA0AUZ9 987 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 AGAP14A8MT82 685 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 FOXO6A8MYZ6 492 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 TRIM49D1C9J1S8 452 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 KRT37O76014 449 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 KRT38O76015 456 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 S1PR4O95977 384 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 AHSGP02765 367 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 PRSS56P0CW18 603 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 OAS2P29728 719 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 SPRP35270 261 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 TAS2R38P59533 333 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 DCDC1P59894 354 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 MAGOHP61326 146 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 CREB5Q02930 508 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 ZBTB16Q05516 673 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 CACNG1Q06432 222 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 DNAJC3Q13217 504 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 BMPR2Q13873 1038 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 ZNF789Q5FWF6 425 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 KCTD16Q68DU8 428 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 MRNIPQ6NTE8 343 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 PSAPL1Q6NUJ1 521 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 Q6ZS52 159 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 RFLNAQ6ZTI6 216 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 TAOK1Q7L7X3 1001 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 PIANPQ8IYJ0 282 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 ISL2Q96A47 359 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 MTBPQ96DY7 904 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 COQ10AQ96MF6 247 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 PLEKHG4BQ96PX9 1271 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 ASB2Q96Q27 587 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 TCF12Q99081 682 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 LMAN1LQ9HAT1 526 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 RAD18Q9NS91 495 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 PKD2L2Q9NZM6 624 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 SERGEFQ9UGK8 458 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 FBXL21Q9UKT6 434 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 SCML1Q9UN30 329 aa14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 MTF2Q9Y483 593 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-211ENST00000595945 BPTFQ12830 3046 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 GLYATL1P3A0A0U1RQE8 302 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 A0A1W2PPM1 405 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 SRP72O76094 671 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 ITGA2BP08514 1039 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CA5AP35218 305 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 MAGEA12P43365 314 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CD151P48509 253 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 LIG3P49916 1009 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CDKN1CP49918 316 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CSRP3P50461 194 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 ILF2Q12905 390 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CRY1Q16526 586 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 FASTKD1Q53R41 847 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 LGSNQ5TDP6 509 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 FAM151BQ6UXP7 276 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 SH2D5Q6ZV89 423 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CYP2U1Q7Z449 544 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 SNX20Q7Z614 316 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 TMPRSS6Q8IU80 811 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 KRT222Q8N1A0 295 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 HDDC3Q8N4P3 179 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 PNPLA1Q8N8W4 532 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 VPS39Q96JC1 886 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 SERAC1Q96JX3 654 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 NELL2Q99435 816 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CDH19Q9H159 772 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 CD320Q9NPF0 282 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 FBXO6Q9NRD1 293 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 OGFRQ9NZT2 677 aa14.68□□□□□ -0.06
SHKBP1-211ENST00000595945 SENP1Q9P0U3 644 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 880.8 ms