RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 C12orf43Q96C57 262 aaKnown RBP12.34□□□□□ -0.43
USP11-206ENST00000469080 BTBD9Q96Q07 612 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 UQCC2Q9BRT2 126 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 CATSPERBQ9H7T0 1116 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 NEK6Q9HC98 313 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 IGSF9Q9P2J2 1179 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 MTF2Q9Y483 593 aaPredicted RBP12.34□□□□□ -0.43
USP11-206ENST00000469080 ST14Q9Y5Y6 855 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 A0A1W2PPW3 197 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 AP1G1O43747 822 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 KCNJ13O60928 360 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 GCATO75600 419 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 GFAPP14136 432 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 MPSTP25325 297 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 KRT6CP48668 564 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 BMXP51813 675 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 WNT3AP56704 352 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 POLD3Q15054 466 aaPredicted RBP12.34□□□□□ -0.43
USP11-206ENST00000469080 RNF111Q6ZNA4 994 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 SLC24A5Q71RS6 500 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 AHI1Q8N157 1196 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 KLHDC9Q8NEP7 349 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 HDAC10Q969S8 669 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 PIF1Q9H611 641 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 OSER1Q9NX31 292 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 PCDHGC4Q9Y5F7 938 aa12.34□□□□□ -0.43
USP11-206ENST00000469080 HAT1O14929 419 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 SNPHO15079 494 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 SNX2O60749 519 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 RFPL1O75677 317 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 SUPT7LO94864 414 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 ALDOAP04075 364 aaKnown RBP12.33□□□□□ -0.44
USP11-206ENST00000469080 HLA-DQB2P05538 268 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 CDH15P55291 814 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 CDK16Q00536 496 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 CDH17Q12864 832 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 ZNF697Q5TEC3 545 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 BORAQ6PGQ7 559 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 CNTD1Q8N815 330 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 FLCNQ8NFG4 579 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 GIMAP1Q8WWP7 306 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 NXNL1Q96CM4 212 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 LRGUKQ96M69 825 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 ABCC13Q9NSE7 274 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 ATPIF1Q9UII2 106 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 V9GYQ6 96 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
USP11-206ENST00000469080 ADAM12O43184 909 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 RAMP2O60895 175 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 NOL3O60936 208 aaKnown RBP12.33□□□□□ -0.44
USP11-206ENST00000469080 SLC10A3P09131 477 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 PIM1P11309 404 aaPredicted RBP12.33□□□□□ -0.44
USP11-206ENST00000469080 GLDCP23378 1020 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 GRK2P25098 689 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 CLLU1OSQ5K130 101 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 LDLRAP1Q5SW96 308 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 NEK5Q6P3R8 708 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 RTN4RL1Q86UN2 441 aaPredicted RBP12.33□□□□□ -0.44
USP11-206ENST00000469080 TBL1YQ9BQ87 522 aa12.33□□□□□ -0.44
USP11-206ENST00000469080 NUP214P35658 2090 aaPredicted RBP12.33□□□□□ -0.44
USP11-206ENST00000469080 A0A0D9SEW6 157 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 HAS3O00219 553 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 TM9SF1O15321 606 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 PROCP04070 461 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CTPS1P17812 591 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CD68P34810 354 aaPredicted RBP12.32□□□□□ -0.44
USP11-206ENST00000469080 PKNOX1P55347 436 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CTAG1AP78358 180 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 XIAPP98170 497 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 TRAF2Q12933 501 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 DNAL1Q4LDG9 190 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 ZNF789Q5FWF6 425 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 KRT80Q6KB66 452 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 ZNF534Q76KX8 674 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 SLC15A4Q8N697 577 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 PSD4Q8NDX1 1056 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 GRIN3AQ8TCU5 1115 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 DENND1AQ8TEH3 1009 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 RTP3Q9BQQ7 232 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 MLPHQ9BV36 600 aaPredicted RBP12.32□□□□□ -0.44
USP11-206ENST00000469080 FRMD8P1Q9BZ68 369 aaPredicted RBP12.32□□□□□ -0.44
USP11-206ENST00000469080 KANSL3Q9P2N6 904 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 GNPTGQ9UJJ9 305 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 HS3ST4Q9Y661 456 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 LCTP09848 1927 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 PTPRFP10586 1907 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 PRPF4O43172 522 aaKnown RBP eCLIP12.32□□□□□ -0.449e-6■□□□□ 10.5
USP11-206ENST00000469080 GPR39O43194 453 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 SPAG6O75602 509 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 SORBS2O94875 1100 aaKnown RBP12.32□□□□□ -0.44
USP11-206ENST00000469080 PIGNO95427 931 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CKMP06732 381 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 IFITM2Q01629 132 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 OTUD1Q5VV17 481 aaPredicted RBP12.32□□□□□ -0.44
USP11-206ENST00000469080 DCLRE1AQ6PJP8 1040 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CNSTQ6PJW8 725 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 CYP2U1Q7Z449 544 aa12.32□□□□□ -0.44
USP11-206ENST00000469080 IFNEQ86WN2 208 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms