RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ABHD8Q96I13 439 aa11.52□□□□□ -0.56
PTCH1-208ENST00000430669 PRICKLE1Q96MT3 831 aaPredicted RBP11.52□□□□□ -0.56
PTCH1-208ENST00000430669 C11orf49Q9H6J7 331 aa11.52□□□□□ -0.56
PTCH1-208ENST00000430669 V9GYQ6 96 aa11.52□□□□□ -0.56
PTCH1-208ENST00000430669 UBTFL6P0CB48 400 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-208ENST00000430669 KELP23276 732 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 PKNOX1P55347 436 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 DPYSQ14117 519 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 MSANTD2Q6P1R3 559 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 CUZD1Q86UP6 607 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 CHRAC1Q9NRG0 131 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 KLQ9UEF7 1012 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 APODP05090 189 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 SERINC5Q86VE9 423 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 SPATA17Q96L03 361 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 PTPRFP10586 1907 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 MAN1A2O60476 641 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 RGS20O76081 388 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 COX7A2P14406 83 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 NTSP30990 170 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 CLK1P49759 484 aaKnown RBP11.52□□□□□ -0.57
PTCH1-208ENST00000430669 POU5F2Q8N7G0 328 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 TRAPPC9Q96Q05 1148 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 INSL6Q9Y581 213 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 PKMP14618 531 aaKnown RBP11.52□□□□□ -0.57
PTCH1-208ENST00000430669 ANK1P16157 1881 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 BBS4Q96RK4 519 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 TCF25Q9BQ70 676 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 C11orf84Q9BUA3 381 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-208ENST00000430669 TMEM248Q9NWD8 314 aa11.52□□□□□ -0.57
PTCH1-208ENST00000430669 NRP1O14786 923 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SLC25A14O95258 325 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 NCF4Q15080 339 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SULT1C3Q6IMI6 304 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 ZBTB2Q8N680 514 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PLEKHO2Q8TD55 490 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PCBD2Q9H0N5 130 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SLC27A6Q9Y2P4 619 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 CXCR3P49682 368 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 IRF8Q02556 426 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 LSM12Q3MHD2 195 aaKnown RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SLC22A17Q8WUG5 538 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 ROPN1LQ96C74 230 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 UNKQ9C0B0 810 aaKnown RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 CAAP1Q9H8G2 361 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SLCO1B3Q9NPD5 702 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 MYRFQ9Y2G1 1151 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 CACNB4O00305 520 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PRKD1Q15139 912 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 TAF5Q15542 800 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 XKR6Q5GH73 641 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 CLEC4CQ8WTT0 213 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PROX1Q92786 737 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 FAM159BA6NKW6 160 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 ZNF623O75123 536 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 TTKP33981 857 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SLC26A3P40879 764 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 FPGSQ05932 587 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 TOP3AQ13472 1001 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 ATG16L2Q8NAA4 619 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 OTULINQ96BN8 352 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 NPY6RQ99463 290 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PTPRHQ9HD43 1115 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 CBSLP0DN79 551 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 TLX1P31314 330 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 CBSP35520 551 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 IRGCQ6NXR0 463 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 TIFABQ6ZNK6 161 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 BPIFA1Q9NP55 256 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 NMBRP28336 390 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 DEFA1P59665 94 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 DEFA3P59666 94 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 LCP2Q13094 533 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 DET1Q7L5Y6 550 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 DNAJB8Q8NHS0 232 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PSMG2Q969U7 264 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 TLE6Q9H808 572 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 DUS2Q9NX74 493 aaKnown RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 CCL16O15467 120 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 EPOP01588 193 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 RING1Q06587 406 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PDE12Q6L8Q7 609 aaKnown RBP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCH1-208ENST00000430669 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 LIMD1Q9UGP4 676 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
PTCH1-208ENST00000430669 SIN3BO75182 1162 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SMIM11AP58511 58 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 BEND5Q7L4P6 421 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 KIAA0100Q14667 2235 aaKnown RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 PRAMEF1O95521 474 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 UQCRBP14927 111 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 ERFP50548 548 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 SNX20Q7Z614 316 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 FAM84AQ96KN4 292 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 PWWP2AQ96N64 755 aa11.5□□□□□ -0.57
PTCH1-208ENST00000430669 NUSAP1Q9BXS6 441 aaKnown RBP11.5□□□□□ -0.57
PTCH1-208ENST00000430669 MAGEL2Q9UJ55 1249 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms