RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 C2CD4AQ8NCU7 369 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 CALML6Q8TD86 181 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 FAM131CQ96AQ9 280 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 MRRFQ96E11 262 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 SUDS3Q9H7L9 328 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 ARHGEF3Q9NR81 526 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 CA14Q9ULX7 337 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 MMP17Q9ULZ9 603 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 TRIOO75962 3097 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 BDP1A6H8Y1 2624 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 HMX2A2RU54 273 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 OR51F1A6NGY5 319 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 HMGB1P1B2RPK0 211 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 RNASEH1O60930 286 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 HOXB2P14652 356 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 BPIP17213 487 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 XPAP23025 273 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 FOXN2P32314 431 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 DRD3P35462 400 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 HADHAP40939 763 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 NEK3P51956 506 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 PRAMEP78395 509 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 FZD5Q13467 585 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 PEX6Q13608 980 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 TMED2Q15363 201 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 CST6Q15828 149 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 POM121L1PQ3SYA9 428 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 TMEM52BQ4KMG9 183 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 HSP90B2PQ58FF3 399 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 EOGTQ5NDL2 527 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 PIP5KL1Q5T9C9 394 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 GRTP1Q5TC63 336 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 TTC7BQ86TV6 843 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 SYNPOQ8N3V7 929 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 AADATQ8N5Z0 425 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 GOLGA6L1Q8N7Z2 621 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 OR6P1Q8NGX9 317 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 OR4L1Q8NH43 312 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 RPLP0P6Q8NHW5 317 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 ATXN2LQ8WWM7 1075 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 SCG3Q8WXD2 468 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 RAB7BQ96AH8 199 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 PBXIP1Q96AQ6 731 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 BPIFA1Q9NP55 256 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 MARCH4Q9P2E8 410 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 NFKBIL1Q9UBC1 381 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 FBXO5Q9UKT4 447 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 NDRG2Q9UN36 371 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 PKP3Q9Y446 797 aa14.72□□□□□ -0.05
SHKBP1-211ENST00000595945 CHURC1-FNTBB4DL54 471 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 PLK4O00444 970 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 CD3EAPO15446 510 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 SLC4A1P02730 911 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 ADRB3P13945 408 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 GM2AP17900 193 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 OGNP20774 298 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 C5AR1P21730 350 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 CNTFP26441 200 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 GABRB3P28472 473 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 P2RY2P41231 377 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 SLC1A2P43004 574 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 ELP6Q0PNE2 266 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 CNTN1Q12860 1018 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 SEMA3AQ14563 771 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 TYSND1Q2T9J0 566 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 ZNF470Q6ECI4 717 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 ERAP2Q6P179 960 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 FBXL19Q6PCT2 694 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 PTAR1Q7Z6K3 402 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 STRA8Q7Z7C7 330 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 TRABD2AQ86V40 505 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 CILP2Q8IUL8 1156 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 DENND6AQ8IWF6 608 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 RAVER1Q8IY67 606 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 UBALD2Q8IYN6 164 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 CNPY4Q8N129 248 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 GABPB2Q8TAK5 448 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 ERLEC1Q96DZ1 483 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 RBBP8Q99708 897 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 STMN4Q9H169 189 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 CENPHQ9H3R5 247 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 LTB4R2Q9NPC1 389 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 TBK1Q9UHD2 729 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 NOVA2Q9UNW9 492 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 IKBKGQ9Y6K9 419 aa14.71□□□□□ -0.05
SHKBP1-211ENST00000595945 TRBV5-4A0A0C4DH59 114 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 IQANK1A0A1B0GTG1 560 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 RGSL1A5PLK6 1076 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 A8MX80 341 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 H0Y858 1186 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 PSMD11O00231 422 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 MID1O15344 667 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 AP1G1O43747 822 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 F7P08709 466 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 SNRPAP09012 282 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 TARSP26639 723 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 ATP5DP30049 168 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 MC4RP32245 332 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 SPAM1P38567 509 aa14.7□□□□□ -0.06
SHKBP1-211ENST00000595945 LEPRP48357 1165 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 262.8 ms