RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 PMPCBO75439 489 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 MT-CYBP00156 380 aaPredicted RBP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 TNFP01375 233 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 APOC2P02655 101 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 SLC4A1P02730 911 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 CELA2BP08218 269 aaPredicted RBP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 PYGMP11217 842 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 CKMT1AP12532 417 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 KELP23276 732 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 ACP1P24666 158 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 TRIM23P36406 574 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 GPR1P46091 355 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 CDKN3Q16667 212 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 QPCTQ16769 361 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 ZCCHC8Q6NZY4 707 aaKnown RBP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 AADACL2Q6P093 401 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 RFLNAQ6ZTI6 216 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 TMPRSS7Q7RTY8 843 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 FSTL5Q8N475 847 aaPredicted RBP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 HTR3CQ8WXA8 447 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 SCG3Q8WXD2 468 aaKnown RBP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 OR1E3Q8WZA6 343 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 SCAMP4Q969E2 229 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 AP2M1Q96CW1 435 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 TEKT5Q96M29 485 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 QKIQ96PU8 341 aaKnown RBP eCLIP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 FAM118BQ9BPY3 351 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 OSBPL8Q9BZF1 889 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 CLPBQ9H078 707 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 C10orf88Q9H8K7 445 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 MRPL40Q9NQ50 206 aaKnown RBP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 PHPT1Q9NRX4 125 aaPredicted RBP12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 EVA1BQ9NVM1 165 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 SIRPGQ9P1W8 387 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 GUCA1BQ9UMX6 200 aa12.6□□□□□ -0.39
PPP1R3F-204ENST00000471261 FREM2Q5SZK8 3169 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 TDRD6O60522 2096 aaKnown RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CPED1A4D0V7 1026 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 HACD1B0YJ81 288 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 ANKRD66B4E2M5 251 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 LMO7DNF2Z398 122 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 YY2O15391 372 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 PIRTP0C851 137 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CDK4P11802 303 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 MYCLP1P12525 358 aaPredicted RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 JUPP14923 745 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 NFKB1P19838 968 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 DUSP3P51452 185 aaPredicted RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 STC1P52823 247 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CDK3Q00526 305 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 OTUD4Q01804 1114 aaKnown RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 WASHC5Q12768 1159 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 ILKQ13418 452 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 ELOCQ15369 112 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 SMAD1Q15797 465 aaKnown RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 ST3GAL2Q16842 350 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CCDC70Q6NSX1 233 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 DOK6Q6PKX4 331 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CCNI2Q6ZMN8 369 aaPredicted RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 PID1Q7Z2X4 250 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 TECPR1Q7Z6L1 1165 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CBARPQ8N350 705 aaPredicted RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 FAM181AQ8N9Y4 354 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CCDC112Q8NEF3 446 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 ACTL9Q8TC94 416 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 GATA6Q92908 595 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 GLMNQ92990 594 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 TBATAQ96M53 351 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 TSGA10Q9BZW7 698 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 ABCG8Q9H221 673 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 CYP4F12Q9HCS2 524 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 FGF22Q9HCT0 170 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 NCKIPSDQ9NZQ3 722 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 COL5A1P20908 1838 aaPredicted RBP12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 LRRK1Q38SD2 2015 aa12.59□□□□□ -0.39
PPP1R3F-204ENST00000471261 LY6G6EA0A0G2JKS1 128 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 PRSS38A1L453 326 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 FAM221BA6H8Z2 402 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 MIF4GDA9UHW6 222 aaKnown RBP12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 TPP1O14773 563 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 KRT86O43790 486 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 TJP3O95049 919 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 HOXC4P09017 264 aaPredicted RBP12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 RBL1P28749 1068 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 CD68P34810 354 aaPredicted RBP12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 RPIAP49247 311 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 EIF3EP60228 445 aaKnown RBP12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 CDK18Q07002 472 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 DPTQ07507 201 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 XRCC4Q13426 336 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 NOMO1Q15155 1222 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 NR0B2Q15466 257 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 C6orf132Q5T0Z8 1188 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 HES3Q5TGS1 186 aa12.58□□□□□ -0.4
PPP1R3F-204ENST00000471261 LYSMD3Q7Z3D4 306 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms