RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 MATN2O00339 956 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 CCL16O15467 120 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 GYG2O15488 501 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 NPHS1O60500 1241 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 SLC4A1P02730 911 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 AOC1P19801 751 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 ABL2P42684 1182 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 HK2P52789 917 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 AGR3Q8TD06 166 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 MAPK15Q8TD08 544 aa25.88■■□□□ 1.73
COL13A1-214ENST00000522165 K7ERQ8 282 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 LEFTY2O00292 366 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 FZD6O60353 706 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 PFKLP17858 780 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 SUOXP51687 545 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 GPR158Q5T848 1215 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 RETSATQ6NUM9 610 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 FAM13CQ8NE31 585 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 BADQ92934 168 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 TMEM106CQ9BVX2 250 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 PLK2Q9NYY3 685 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 CLEC4EQ9ULY5 219 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 MTF2Q9Y483 593 aaPredicted RBP25.87■■□□□ 1.73
COL13A1-214ENST00000522165 NEMP2A6NFY4 417 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 HIDE1A8MVS5 230 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 GSC2O15499 205 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 HSPA8P11142 646 aaKnown RBP25.87■■□□□ 1.73
COL13A1-214ENST00000522165 SLC9B1Q4ZJI4 515 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 TRIM67Q6ZTA4 783 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 PIWIL4Q7Z3Z4 852 aaKnown RBP25.87■■□□□ 1.73
COL13A1-214ENST00000522165 TTC30BQ8N4P2 665 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 TEX9Q8N6V9 391 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 CCNYL1Q8N7R7 359 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 EFHBQ8N7U6 833 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 SP7Q8TDD2 431 aaPredicted RBP25.87■■□□□ 1.73
COL13A1-214ENST00000522165 CCDC126Q96EE4 140 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 AARSD1Q9BTE6 412 aaKnown RBP25.87■■□□□ 1.73
COL13A1-214ENST00000522165 POPDC3Q9HBV1 291 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.87■■□□□ 1.73
COL13A1-214ENST00000522165 ZDHHC2Q9UIJ5 367 aa25.87■■□□□ 1.73
COL13A1-214ENST00000522165 CPA2P48052 419 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 AP1S1P61966 158 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 FPGSQ05932 587 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 TPGS1Q6ZTW0 290 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 SUGP1Q8IWZ8 645 aaKnown RBP25.86■■□□□ 1.73
COL13A1-214ENST00000522165 MAGEC3Q8TD91 643 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 ACDQ96AP0 544 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 TCF12Q99081 682 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 RAD9AQ99638 391 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 POLR3BQ9NW08 1133 aaPredicted RBP25.86■■□□□ 1.73
COL13A1-214ENST00000522165 NCKIPSDQ9NZQ3 722 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 LZTS1Q9Y250 596 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 LAMA2P24043 3122 aaKnown RBP25.86■■□□□ 1.73
COL13A1-214ENST00000522165 HDAC3O15379 428 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 CSPG5O95196 566 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 TFEBP19484 476 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 KCNA5P22460 613 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 CCR2P41597 374 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 LMAN2Q12907 356 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 PPM1LQ5SGD2 360 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 PLPP4Q5VZY2 271 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 MRPL43Q8N983 215 aaKnown RBP25.86■■□□□ 1.73
COL13A1-214ENST00000522165 FIBINQ8TAL6 211 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 LPGAT1Q92604 370 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 SMG9Q9H0W8 520 aaKnown RBP25.86■■□□□ 1.73
COL13A1-214ENST00000522165 HACD3Q9P035 362 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 PCDHB9Q9Y5E1 797 aa25.86■■□□□ 1.73
COL13A1-214ENST00000522165 LCHNA4D1U4 455 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 A8MT66 165 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 B2RBV5 119 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 SMAD6O43541 496 aaKnown RBP25.85■■□□□ 1.73
COL13A1-214ENST00000522165 BMPR1AP36894 532 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 SERPINB5P36952 375 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 KDSRQ06136 332 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 PTPRRQ15256 657 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 TMEM240Q5SV17 173 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 SEL1L3Q68CR1 1132 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 ISCA2Q86U28 154 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 TM6SF2Q9BZW4 377 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 HCFC1R1Q9NWW0 138 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 KIAA1522Q9P206 1035 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-214ENST00000522165 FKBPLQ9UIM3 349 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 ARHGAP26Q9UNA1 814 aa25.85■■□□□ 1.73
COL13A1-214ENST00000522165 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-214ENST00000522165 SPECC1L-ADORA2AF8WAN1 911 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 WFS1O76024 890 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 IPO13O94829 963 aaKnown RBP25.84■■□□□ 1.73
COL13A1-214ENST00000522165 SNUPNO95149 360 aaKnown RBP25.84■■□□□ 1.73
COL13A1-214ENST00000522165 CNDP1Q96KN2 507 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 ALG9Q9H6U8 611 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 MAN1C1Q9NR34 630 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 VTI1BQ9UEU0 232 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 SLCO1B7G3V0H7 640 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 STX7O15400 261 aaKnown RBP25.84■■□□□ 1.73
COL13A1-214ENST00000522165 GRID2O43424 1007 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 CTNNB1P35222 781 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 SHKBP1Q8TBC3 707 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 SHCBP1LQ9BZQ2 653 aa25.84■■□□□ 1.73
COL13A1-214ENST00000522165 RPL26L1Q9UNX3 145 aaKnown RBP25.84■■□□□ 1.73
COL13A1-214ENST00000522165 UBA6A0AVT1 1052 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms