RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 PELI3Q8N2H9 469 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 TAB3Q8N5C8 712 aaPredicted RBP13.6□□□□□ -0.23
FDPS-219ENST00000495308 SLC25A41Q8N5S1 370 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 COG1Q8WTW3 980 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 NUS1Q96E22 293 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 PBKQ96KB5 322 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 WDR24Q96S15 920 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 OSBPL9Q96SU4 736 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 FRMD8P1Q9BZ68 369 aaPredicted RBP13.6□□□□□ -0.23
FDPS-219ENST00000495308 ZNF106Q9H2Y7 1883 aaKnown RBP13.6□□□□□ -0.23
FDPS-219ENST00000495308 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 CD84Q9UIB8 345 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 SNX12Q9UMY4 172 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 ZNF148Q9UQR1 794 aa13.6□□□□□ -0.23
FDPS-219ENST00000495308 CABIN1Q9Y6J0 2220 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 PSMD11O00231 422 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 SLC30A4O14863 429 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 NDST3O95803 873 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 SLC4A1P02730 911 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 ATXN1LP0C7T5 689 aaKnown RBP13.59□□□□□ -0.23
FDPS-219ENST00000495308 RABIFP47224 123 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 GEMP55040 296 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 PFN3P60673 137 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 OVGP1Q12889 678 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 MPP3Q13368 585 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 PDE1CQ14123 709 aaPredicted RBP13.59□□□□□ -0.23
FDPS-219ENST00000495308 KCTD19Q17RG1 926 aaPredicted RBP13.59□□□□□ -0.23
FDPS-219ENST00000495308 SIRPB2Q5JXA9 342 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 Q6ZVL8 140 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 CBARPQ8N350 705 aaPredicted RBP13.59□□□□□ -0.23
FDPS-219ENST00000495308 RASGEF1CQ8N431 466 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 MAIP1Q8WWC4 291 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 DTD2Q96FN9 168 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 ELF4Q99607 663 aaPredicted RBP13.59□□□□□ -0.23
FDPS-219ENST00000495308 FICDQ9BVA6 458 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 FSD1LQ9BXM9 530 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 GPR27Q9NS67 375 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 TM7SF3Q9NS93 570 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 DNAAF2Q9NVR5 837 aaKnown RBP13.59□□□□□ -0.23
FDPS-219ENST00000495308 SHOC2Q9UQ13 582 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 SPO11Q9Y5K1 396 aa13.59□□□□□ -0.23
FDPS-219ENST00000495308 LOC285095A0A1B0GVY8 99 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 GOLGA6CA6NDK9 693 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 GOLGA6BA6NDN3 693 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 K7ESM1 405 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 ZNF185O15231 689 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 GCATO75600 419 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 ZNF189O75820 626 aaPredicted RBP13.58□□□□□ -0.24
FDPS-219ENST00000495308 ANXA9O76027 345 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 METTL18O95568 372 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 AGTP01019 485 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 IFNB1P01574 187 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 ITGAVP06756 1048 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 GOLGA6DP0CG33 693 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 ETS1P14921 441 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 ZNF30P17039 623 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 CCT8P50990 548 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 STC1P52823 247 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 PTSQ03393 145 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 INPP5AQ14642 412 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 SHBQ15464 509 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 SLC1A5Q15758 541 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 CCNG2Q16589 344 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 CDKN3Q16667 212 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 ZNF542PQ5EBM4 170 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 TECPR1Q7Z6L1 1165 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 PRELID2Q8N945 189 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 GLIS1Q8NBF1 620 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 RTP4Q96DX8 246 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 LYSMD1Q96S90 227 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 APOL2Q9BQE5 337 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 AP1M1Q9BXS5 423 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 GOLGA6AQ9NYA3 693 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 ZNF711Q9Y462 761 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 OR1A2Q9Y585 309 aa13.58□□□□□ -0.24
FDPS-219ENST00000495308 SPTY2D1-AS1A0A0U1RR47 76 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 A0A1B0GTQ1 180 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 PGRMC1O00264 195 aaKnown RBP13.57□□□□□ -0.24
FDPS-219ENST00000495308 AURKAO14965 403 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 SDC3O75056 442 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 USP12O75317 370 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 CD59P13987 128 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 TNNT3P45378 269 aaPredicted RBP13.57□□□□□ -0.24
FDPS-219ENST00000495308 KCNJ1P48048 391 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 THOP1P52888 689 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 BNIP3Q12983 259 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 MTM1Q13496 603 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 FZD2Q14332 565 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 SPARCL1Q14515 664 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 PRPSAP1Q14558 356 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 PARP6Q2NL67 630 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 P3H1Q32P28 736 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 CCDC70Q6NSX1 233 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 ESRP1Q6NXG1 681 aaKnown RBP13.57□□□□□ -0.24
FDPS-219ENST00000495308 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 FAM174AQ8TBP5 190 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 SCAMP4Q969E2 229 aa13.57□□□□□ -0.24
FDPS-219ENST00000495308 EID2BQ96D98 161 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms