RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 TMEM216Q9P0N5 145 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 PSMD13Q9UNM6 376 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 DMTF1Q9Y222 760 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CPQQ9Y646 472 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 EVPLQ92817 2033 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 TBC1D3BA6NDS4 549 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 SLC38A8A6NNN8 435 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 ZNF839A8K0R7 811 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 MRASO14807 208 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CD3EAPO15446 510 aaKnown RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CCNG1P51959 295 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 NAA20P61599 178 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 SLC10A7Q0GE19 358 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 LRRC74AQ0VAA2 488 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 NFYCQ13952 458 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 ACOX1Q15067 660 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 AASDHQ4L235 1098 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 ZCCHC7Q8N3Z6 543 aaKnown RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 DCBLD1Q8N8Z6 715 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 HJURPQ8NCD3 748 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 ACMSDQ8TDX5 336 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 KBTBD7Q8WVZ9 684 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 POLR1BQ9H9Y6 1135 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 C6orf203Q9P0P8 240 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CDH22Q9UJ99 828 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CROTQ9UKG9 612 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 ANKRD6Q9Y2G4 727 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 MYO1GB0I1T2 1018 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 F8W810 466 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CLDN11O75508 207 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 TOP3BO95985 862 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 GLUD1P00367 558 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 POLR2EP19388 210 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 LPOP22079 712 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 LRPAP1P30533 357 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 S100A5P33763 92 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 SEMA5AQ13591 1074 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FASTKQ14296 549 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 GPR158Q5T848 1215 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FNDC5Q8NAU1 212 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ST13P5Q8NFI4 369 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 TNIP2Q8NFZ5 429 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 OR4L1Q8NH43 312 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 PLEKHG4BQ96PX9 1271 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 HGH1Q9BTY7 390 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CCDC28BQ9BUN5 200 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 TNKS2Q9H2K2 1166 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ADAM7Q9H2U9 754 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 NEDD8-MDP1E9PL57 170 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 PARNO95453 639 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ITGB1P05556 798 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CCDC159P0C7I6 412 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 SLC2A4P14672 509 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ATP5F1P24539 256 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 MC4RP32245 332 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 GABRB2P47870 512 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CLCN5P51795 746 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CYP4F8P98187 520 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 TRIM60Q495X7 471 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FBXL22Q6P050 247 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 DOK6Q6PKX4 331 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ARCQ7LC44 396 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 OR10T2Q8NGX3 314 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ING5Q8WYH8 240 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 MED8Q96G25 268 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 EBF4Q9BQW3 602 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ZNF395Q9H8N7 513 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FETUBQ9UGM5 382 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 OR51F1A6NGY5 319 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 J3KR12 359 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 TGDSO95455 350 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 STAU1O95793 577 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 FGF1P05230 155 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 MPSTP25325 297 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 PPM1AP35813 382 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ACTR3P61158 418 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 SIX1Q15475 284 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CCDC85BQ15834 202 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 MORN1Q5T089 497 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 STXBP5Q5T5C0 1151 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ELOVL6Q9H5J4 265 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 LNPEPQ9UIQ6 1025 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 SLC13A4Q9UKG4 626 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 NENFQ9UMX5 172 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CNTN6Q9UQ52 1028 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 RAD54BQ9Y620 910 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CLUHO75153 1309 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 LAMB1P07942 1786 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 CCDC189A1A4V9 331 aa11.32□□□□□ -0.6
SMPD4-218ENST00000482171 RGSL1A5PLK6 1076 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms