RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GOLGA8CPA6NN73 597 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 H7C0C1 242 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 K7ESM1 405 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 TJP3O95049 919 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 MT-CYBP00156 380 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 PTMAP06454 111 aaKnown RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 C1SP09871 688 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 ZNF30P17039 623 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 PMLP29590 882 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 CD68P34810 354 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 ETV3P41162 512 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 ATP5OP48047 213 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 HNRNPKP61978 463 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 EIF2B5Q13144 721 aaKnown RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 INPP5AQ14642 412 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 PCSK7Q16549 785 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 RBFAQ8N0V3 343 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 ZNF567Q8N184 647 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 PELI3Q8N2H9 469 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 EID2Q8N6I1 236 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 ZNF548Q8NEK5 533 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 SPATA22Q8NHS9 363 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 TADA1Q96BN2 335 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 PDXPQ96GD0 296 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 TRIB3Q96RU7 358 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 LYSMD1Q96S90 227 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 VAT1Q99536 393 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 FAM118BQ9BPY3 351 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 WDR26Q9H7D7 661 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 LZTFL1Q9NQ48 299 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 UCKL1Q9NWZ5 548 aa12.91□□□□□ -0.34
COL5A1-206ENST00000465877 APOBEC3BQ9UH17 382 aaKnown RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 PNMA8BQ9ULN7 279 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
COL5A1-206ENST00000465877 PLXNB3Q9ULL4 1909 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 GOLGA6L9A6NEM1 432 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 ANKRD66B4E2M5 251 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 F5H423 210 aaPredicted RBP12.9□□□□□ -0.34
COL5A1-206ENST00000465877 FFAR2O15552 330 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 CSF2P04141 144 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 RBP3P10745 1247 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 JUNDP17535 347 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 DGKAP23743 735 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 HTR1BP28222 390 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 RBL1P28749 1068 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 KIAA1024LP59773 190 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 EIF3EP60228 445 aaKnown RBP12.9□□□□□ -0.34
COL5A1-206ENST00000465877 FOXC1Q12948 553 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 KLF1Q13351 362 aaPredicted RBP12.9□□□□□ -0.34
COL5A1-206ENST00000465877 QPCTQ16769 361 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 SEL1L2Q5TEA6 688 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 CRTC1Q6UUV9 634 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 PHACTR4Q8IZ21 702 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 FUBP1Q96AE4 644 aaKnown RBP12.9□□□□□ -0.34
COL5A1-206ENST00000465877 WDR92Q96MX6 357 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 APOOQ9BUR5 198 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 LRRC61Q9BV99 259 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 ADGRE3Q9BY15 652 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 GBA3Q9H227 469 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 C10orf88Q9H8K7 445 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 TOR4AQ9NXH8 423 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 KCTD5Q9NXV2 234 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 CD84Q9UIB8 345 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 KLF15Q9UIH9 416 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 PPP2R2CQ9Y2T4 447 aa12.9□□□□□ -0.34
COL5A1-206ENST00000465877 FREM2Q5SZK8 3169 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 GOLGA6CA6NDK9 693 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 GOLGA6BA6NDN3 693 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 CACNB4O00305 520 aaPredicted RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 GOLGA6DP0CG33 693 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 TSHRP16473 764 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 STC1P52823 247 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 CDK18Q07002 472 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 ALG11Q2TAA5 492 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 RAET1GQ6H3X3 334 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 Q6ZVL8 140 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 HEATR4Q86WZ0 1026 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 CBARPQ8N350 705 aaPredicted RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 SLC25A45Q8N413 288 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 OR4C6Q8NH72 309 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 BTN2A2Q8WVV5 523 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 OXNAD1Q96HP4 312 aaPredicted RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 CNDP2Q96KP4 475 aaKnown RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 FERMT1Q9BQL6 677 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 MLPHQ9BV36 600 aaPredicted RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 TCEAL2Q9H3H9 227 aaPredicted RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 GOLGA6AQ9NYA3 693 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 UBP1Q9NZI7 540 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 KLQ9UEF7 1012 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
COL5A1-206ENST00000465877 APOBEC2Q9Y235 224 aaKnown RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 GOLGA4Q13439 2230 aaKnown RBP12.89□□□□□ -0.35
COL5A1-206ENST00000465877 ENC1O14682 589 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 KCNN4O15554 427 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 AQP9O43315 295 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 TNFSF14O43557 240 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 PMPCBO75439 489 aa12.88□□□□□ -0.35
COL5A1-206ENST00000465877 ZNF189O75820 626 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms