RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ACADVLP49748 655 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 WNT3AP56704 352 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 IL2P60568 153 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 MYBPC3Q14896 1274 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 GCNT7Q6ZNI0 430 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 OTOP3Q7RTS5 596 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 KBTBD8Q8NFY9 601 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 SPPL2AQ8TCT8 520 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 TWIST2Q8WVJ9 160 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 FBXL8Q96CD0 374 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 COQ7Q99807 217 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 GBA2Q9HCG7 927 aaPredicted RBP14.67□□□□□ -0.06
VPS36-207ENST00000611132 ZNF112Q9UJU3 913 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 A0A0J9YVX5 310 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 A0A1W2PPW3 197 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 GPR25O00155 361 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 TSPAN3O60637 253 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 SERPINI2O75830 405 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 IL12RB1P42701 662 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 RECQLP46063 649 aaPredicted RBP14.67□□□□□ -0.06
VPS36-207ENST00000611132 GNA12Q03113 381 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 INO80DQ53TQ3 878 aaPredicted RBP14.67□□□□□ -0.06
VPS36-207ENST00000611132 RERGLQ9H628 205 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS36-207ENST00000611132 HMGXB4Q9UGU5 601 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 OAZ3Q9UMX2 235 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 PSAT1Q9Y617 370 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 PTPRJQ12913 1337 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 PTPRAP18433 802 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 CDH5P33151 784 aaPredicted RBP14.67□□□□□ -0.06
VPS36-207ENST00000611132 MTHFRP42898 656 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 EFEMP1Q12805 493 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 HECTD2Q5U5R9 776 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 WSCD1Q658N2 575 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 GPRIN3Q6ZVF9 776 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 SPATA19Q7Z5L4 167 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 OR2T12Q8NG77 320 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 TEKT5Q96M29 485 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 NODALQ96S42 347 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 DUSP16Q9BY84 665 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 EHD3Q9NZN3 535 aa14.67□□□□□ -0.06
VPS36-207ENST00000611132 DPYSL4O14531 572 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 ALDOAP04075 364 aaKnown RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 TRIM32Q13049 653 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 INTS11Q5TA45 600 aaKnown RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 CATSPERGQ6ZRH7 1159 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 KIAA0408Q6ZU52 694 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 KBTBD6Q86V97 674 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 KRT73Q86Y46 540 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 PPM1MQ96MI6 270 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 PRICKLE1Q96MT3 831 aaPredicted RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 TWNKQ96RR1 684 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 YTHDF1Q9BYJ9 559 aaKnown RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 MROH8Q9H579 483 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 FAM124BQ9H5Z6 455 aaPredicted RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 PDE10AQ9Y233 779 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 TNPO3Q9Y5L0 923 aaKnown RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 CAPN14A8MX76 684 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 HTRA2O43464 458 aaPredicted RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 GLUD2P49448 558 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 MOGQ16653 247 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 FAM187BQ17R55 369 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 TMEM214Q6NUQ4 689 aaKnown RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 ZNF605Q86T29 641 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 DENND6AQ8IWF6 608 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 PTCD2Q8WV60 388 aaKnown RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 RSPH1Q8WYR4 309 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 USP29Q9HBJ7 922 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 STMN3Q9NZ72 180 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 EFCAB10A6NFE3 127 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 BHMG1C9JSJ3 638 aaPredicted RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 ARHGEF7Q14155 803 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 ZNF549Q6P9A3 640 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 SCAIQ8N9R8 606 aa14.66□□□□□ -0.06
VPS36-207ENST00000611132 IFT80Q9P2H3 777 aaPredicted RBP14.66□□□□□ -0.06
VPS36-207ENST00000611132 SH3PXD2BA1X283 911 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 NEMP2A6NFY4 417 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 CENPXA8MT69 81 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 GRM5P41594 1212 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 PDZK1Q5T2W1 519 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 ESRP1Q6NXG1 681 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 UTS2BQ765I0 119 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 RALGPS2Q86X27 583 aaPredicted RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 COPS5Q92905 334 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 PEBP4Q96S96 227 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 KATNAL1Q9BW62 490 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 F5H5T6 163 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 CLDN5O00501 218 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 LGALS2P05162 132 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 PRKCQQ04759 706 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 C1DQ13901 141 aaKnown RBP14.65□□□□□ -0.06
VPS36-207ENST00000611132 ACAP2Q15057 778 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 ERMP1Q7Z2K6 904 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 PQLC3Q8N755 202 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 ISOC1Q96CN7 298 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 TPD52L3Q96J77 140 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 SENP8Q96LD8 212 aa14.65□□□□□ -0.06
VPS36-207ENST00000611132 SERPINB11Q96P15 392 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 396.1 ms