RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 SHBQ15464 509 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 N4BP2L1Q5TBK1 243 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-229ENST00000593049 MACC1Q6ZN28 852 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 RAVER1Q8IY67 606 aaKnown RBP16.47■□□□□ 0.23
DNMT1-229ENST00000593049 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.47■□□□□ 0.23
DNMT1-229ENST00000593049 CNTD1Q8N815 330 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 BAHD1Q8TBE0 780 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-229ENST00000593049 BTN2A2Q8WVV5 523 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 HAUS1Q96CS2 278 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 IMP4Q96G21 291 aaKnown RBP16.47■□□□□ 0.23
DNMT1-229ENST00000593049 TEKT5Q96M29 485 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 CAMK1GQ96NX5 476 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 AGAP3Q96P47 875 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 QKIQ96PU8 341 aaKnown RBP eCLIP16.47■□□□□ 0.23
DNMT1-229ENST00000593049 GUCA1BQ9UMX6 200 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 CHKBQ9Y259 395 aa16.47■□□□□ 0.23
DNMT1-229ENST00000593049 COL5A1P20908 1838 aaPredicted RBP16.47■□□□□ 0.23
DNMT1-229ENST00000593049 A0A0J9YYE9 177 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 GOLGA6L9A6NEM1 432 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 H7C0C1 242 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 TNFSF14O43557 240 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 FTCDO95954 541 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 TRBC1P01850 177 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 CSF2P04141 144 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 PDHA1P08559 390 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 PTPN3P26045 913 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 HTR1BP28222 390 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 ATP5OP48047 213 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 SKOR1P84550 965 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 ADCY2Q08462 1091 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 FZD2Q14332 565 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 CNGA3Q16281 694 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 HS1BP3Q53T59 392 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 ZC3H18Q86VM9 953 aaKnown RBP16.46■□□□□ 0.23
DNMT1-229ENST00000593049 GATAD2AQ86YP4 633 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 TTC13Q8NBP0 860 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 ALG3Q92685 438 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 ANP32BQ92688 251 aaKnown RBP16.46■□□□□ 0.23
DNMT1-229ENST00000593049 HES6Q96HZ4 224 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 COQ10AQ96MF6 247 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 ALS2CR12Q96Q35 445 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 GLOD4Q9HC38 313 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 MBNL1Q9NR56 388 aaKnown RBP16.46■□□□□ 0.23
DNMT1-229ENST00000593049 DNAJC28Q9NX36 388 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 FTSJ1Q9UET6 329 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 TRHDEQ9UKU6 1024 aa16.46■□□□□ 0.23
DNMT1-229ENST00000593049 APOBEC2Q9Y235 224 aaKnown RBP16.46■□□□□ 0.23
DNMT1-229ENST00000593049 SPAARA0A1B0GVQ0 90 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 NEMP2A6NFY4 417 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 CAPN8A6NHC0 703 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 NPIPB15A6NHN6 443 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-229ENST00000593049 A8MX80 341 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 MMP2P08253 660 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 ALPPL2P10696 532 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 PYGMP11217 842 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 NME1P15531 152 aaKnown RBP16.45■□□□□ 0.22
DNMT1-229ENST00000593049 DGKAP23743 735 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 TNNT3P45378 269 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-229ENST00000593049 BLKP51451 505 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 SEMG2Q02383 582 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 BNIP3Q12983 259 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 INPP5AQ14642 412 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 CCDC70Q6NSX1 233 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 KANSL1Q7Z3B3 1105 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 CDKL3Q8IVW4 592 aaPredicted RBP16.45■□□□□ 0.22
DNMT1-229ENST00000593049 HTR3CQ8WXA8 447 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 NUS1Q96E22 293 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 TBATAQ96M53 351 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 LYSMD1Q96S90 227 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 SRPK1Q96SB4 655 aaKnown RBP16.45■□□□□ 0.22
DNMT1-229ENST00000593049 APOOQ9BUR5 198 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 BTBD3Q9Y2F9 522 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 CAPN6Q9Y6Q1 641 aa16.45■□□□□ 0.22
DNMT1-229ENST00000593049 A0A0U1RQJ8 604 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 PDE2AO00408 941 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 DDX3YO15523 660 aaKnown RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 PIAS2O75928 621 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 STK10O94804 968 aaKnown RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 PRLP01236 227 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 PCCBP05166 539 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 HOXC4P09017 264 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 CTPS1P17812 591 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 KELP23276 732 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 HNF1BP35680 557 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 CCZ1BP86790 482 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 CCZ1P86791 482 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 OTUD4Q01804 1114 aaKnown RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 WASHC5Q12768 1159 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 NFATC4Q14934 902 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 ESRP1Q6NXG1 681 aaKnown RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 CBARPQ8N350 705 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 LPCAT1Q8NF37 534 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 ACTL9Q8TC94 416 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 TADA1Q96BN2 335 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 DTD2Q96FN9 168 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 RBM15Q96T37 977 aaKnown RBP eCLIP16.44■□□□□ 0.224e-8■■■■■ 43.6
DNMT1-229ENST00000593049 MLPHQ9BV36 600 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-229ENST00000593049 DUSP23Q9BVJ7 150 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 CEP41Q9BYV8 373 aa16.44■□□□□ 0.22
DNMT1-229ENST00000593049 KLHL8Q9P2G9 620 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms