RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 ZDHHC18Q9NUE0 388 aa17.13■□□□□ 0.33
RPRD1A-209ENST00000590898 SMAPO00193 183 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 NEMP1O14524 444 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 SPINT1O43278 529 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 LILRB5O75023 590 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 NDUFS2O75306 463 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 RPP40O75818 363 aaKnown RBP17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 HNF1BP35680 557 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 MMP12P39900 470 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 FAM193AP78312 1265 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 GALNT3Q14435 633 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 DENND5AQ6IQ26 1287 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 DPPA4Q7L190 304 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 RAVER1Q8IY67 606 aaKnown RBP17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 FAM160A2Q8N612 972 aaPredicted RBP17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 CPT1BQ92523 772 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 IRF2BPLQ9H1B7 796 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 TRABDQ9H4I3 376 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 FAM53CQ9NYF3 392 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 HACD3Q9P035 362 aa17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 MBD1Q9UIS9 605 aaPredicted RBP17.12■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3DA0A087WVF3 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3IA0A087WXS9 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3EA0A087X179 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3KA0A087X1G2 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3FA6NER0 549 aaPredicted RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 CAPN8A6NHC0 703 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3LB9A6J9 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 DNALI1O14645 258 aaPredicted RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 ATP8B1O43520 1251 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3HP0C7X1 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 ZNF30P17039 623 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 VIPR1P32241 457 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 DRG2P55039 364 aaKnown RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 PLTPP55058 493 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 SPARCL1Q14515 664 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3GQ6DHY5 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3CQ6IPX1 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 KIAA1161Q6NSJ0 714 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 PPIL6Q8IXY8 311 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TBC1D3Q8IZP1 549 aaPredicted RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 CBARPQ8N350 705 aaPredicted RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 FRMD1Q8N878 549 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 MCUQ8NE86 351 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 FBXO25Q8TCJ0 367 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 GPR174Q9BXC1 333 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 B4GALT6Q9UBX8 382 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 VPS13AQ96RL7 3174 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TP73O15350 636 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 MAP3K13O43283 966 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 HRO43593 1189 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 PCDH8O95206 1070 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 CTPS1P17812 591 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 ITIH2P19823 946 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 CHRNA4P43681 627 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 CCR5P51681 352 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 CDH17Q12864 832 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 RNASEH2BQ5TBB1 312 aaKnown RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 TRIM69Q86WT6 500 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 SLC25A41Q8N5S1 370 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 NAT8LQ8N9F0 302 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 BBOF1Q8ND07 529 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 SNF8Q96H20 258 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 DUSP15Q9H1R2 295 aaPredicted RBP17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 CASS4Q9NQ75 786 aa17.11■□□□□ 0.33
RPRD1A-209ENST00000590898 NPIPB15A6NHN6 443 aaPredicted RBP17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 PSMD11O00231 422 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 USP12O75317 370 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 ALPIP09923 528 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 NUDT1P36639 197 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 MSLNQ13421 630 aaPredicted RBP17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 MORF4L2Q15014 288 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 CDKN3Q16667 212 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 LRRC73Q5JTD7 316 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 LIPIQ6XZB0 460 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 HORMAD1Q86X24 394 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 EIF1ADQ8N9N8 165 aaKnown RBP17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 ASB12Q8WXK4 309 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 ZC3H10Q96K80 434 aaKnown RBP17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 KCTD5Q9NXV2 234 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 INVSQ9Y283 1065 aa17.1■□□□□ 0.33
RPRD1A-209ENST00000590898 TCRBV7S3A2A0A539 114 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 PRKCGP05129 697 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 MLNP12872 115 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 RPL6Q02878 288 aaKnown RBP17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 CREB5Q02930 508 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 RALGDSQ12967 914 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 OLIG2Q13516 323 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 ARHGEF7Q14155 803 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 SYCP2LQ5T4T6 812 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 LRRC8BQ6P9F7 803 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 ZC3H14Q6PJT7 736 aaKnown RBP17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 CRTC1Q6UUV9 634 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 PPP1R21Q6ZMI0 780 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 BRSK1Q8TDC3 778 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 FOXJ1Q92949 421 aa17.09■□□□□ 0.33
RPRD1A-209ENST00000590898 APOL2Q9BQE5 337 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms