RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 HIST1H2ABP04908 130 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 HIST1H2ADP20671 130 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ITGAXP20702 1163 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 SCP2P22307 547 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 HOXD9P28356 352 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 HADHAP40939 763 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 PPP3CCP48454 512 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 CAMPP49913 170 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 RASSF2P50749 326 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 MFAP4P55083 255 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 RRP1P56182 461 aaKnown RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZP1P60852 638 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 GRIK3Q13003 919 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 IKQ13123 557 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 Q4G0T1 1027 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 DNTTIP2Q5QJE6 756 aaKnown RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 DCAF12L2Q5VW00 463 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 GGNBP1Q5YKI7 109 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZNF626Q68DY1 528 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 SIGIRRQ6IA17 410 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 METTL2BQ6P1Q9 378 aaKnown RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 Q6ZTK2 550 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 HIST3H2AQ7L7L0 130 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 CACNA2D4Q7Z3S7 1137 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 CCDC13Q8IYE1 715 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 RNF168Q8IYW5 571 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 MIGA1Q8NAN2 632 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 AGBL3Q8NEM8 1001 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 NTN5Q8WTR8 489 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZKSCAN4Q969J2 545 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 RPL36ALQ969Q0 106 aaKnown RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ERP27Q96DN0 273 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 PABPC5Q96DU9 382 aaKnown RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 METTL2AQ96IZ6 378 aaKnown RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 SLF1Q9BQI6 1058 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 SF3B5Q9BWJ5 86 aaKnown RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 OSGEPL1Q9H4B0 414 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 PLEKHA4Q9H4M7 779 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 POLR1BQ9H9Y6 1135 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 GIMAP4Q9NUV9 329 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 CLIC5Q9NZA1 410 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 OGFRQ9NZT2 677 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 RCOR1Q9UKL0 485 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 TTC7AQ9ULT0 858 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 FZD10Q9ULW2 581 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ADAM18Q9Y3Q7 739 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 CEPT1Q9Y6K0 416 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZNF804BA4D1E1 1349 aa3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 TTBK1Q5TCY1 1321 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 ZNF644Q9H582 1327 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL2-211ENST00000561189 A0A0U1RQF3 1178 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 A0A1W2PQ09 198 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 FRMD3A2A2Y4 597 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 A8MV72 311 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 H0YGN5 161 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 MASP2O00187 686 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 TAF4O00268 1085 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 SOCS2O14508 198 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 DAB1O75553 588 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 BEST1O76090 585 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 ARSBP15848 533 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 NAGAP17050 411 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 EDN2P20800 178 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 RRM1P23921 792 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 TM4SF1P30408 202 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 MAPK4P31152 587 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 DCTDP32321 178 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 RPL3P39023 403 aaKnown RBP3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 ABCG1P45844 678 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 SLC15A1P46059 708 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 EFNA5P52803 228 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 CEBPZQ03701 1054 aaKnown RBP3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 PPATQ06203 517 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 SRSF1Q07955 248 aaKnown RBP eCLIP3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 PSMD6Q15008 389 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 SOWAHAQ2M3V2 549 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 C15orf59Q2T9L4 293 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 PCGF3Q3KNV8 242 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 RAB41Q5JT25 222 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 COLEC12Q5KU26 742 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 WASHC2DQ5SRD0 308 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 SLC30A6Q6NXT4 461 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 TMEM71Q6P5X7 295 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 COLCA1Q6ZS62 124 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 SHFQ7M4L6 423 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 ARID3BQ8IVW6 561 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 MMP21Q8N119 569 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 TEX45Q8NA69 505 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 POC5Q8NA72 575 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 POMGNT2Q8NAT1 580 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 KDM1BQ8NB78 822 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 C7orf57Q8NEG2 295 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 TRIB2Q92519 343 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 SLC25A28Q96A46 364 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 MTBPQ96DY7 904 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 RRNAD1Q96FB5 475 aaKnown RBP3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 PERPQ96FX8 193 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 WDFY2Q96P53 400 aa3.58□□□□□ -1.84
CTDSPL2-211ENST00000561189 FAM110AQ9BQ89 295 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms