RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ARRDC2Q8TBH0 407 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 TSR3Q9UJK0 312 aaKnown RBP14.83□□□□□ -0.04
DDX55-209ENST00000542286 SORCS3Q9UPU3 1222 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 CDYLQ9Y232 598 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 GREB1Q4ZG55 1949 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 C15orf38-AP3S2A0A0A6YYH1 394 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 A8MT66 165 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 CCNT2O60583 730 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 OAZ2O95190 189 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 SIX3O95343 332 aaPredicted RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 TFAP2AP05549 437 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 SMIM18P0DKX4 95 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 RPL5P46777 297 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 RGRP47804 291 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 MRPS22P82650 360 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 FRG1Q14331 258 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 POLD3Q15054 466 aaPredicted RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 TRIP10Q15642 601 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 HECTD2Q5U5R9 776 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 KIAA0930Q6ICG6 404 aaPredicted RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 FBXL19Q6PCT2 694 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 ARPINQ7Z6K5 226 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 KLHDC8BQ8IXV7 354 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 PIP4K2CQ8TBX8 421 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 SREK1Q8WXA9 508 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 PCDHB5Q9Y5E4 795 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 UBFD1O14562 309 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 GPR39O43194 453 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 CDK4P11802 303 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 PRAMEP78395 509 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 FOLH1Q04609 750 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 SULT2A1Q06520 285 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 PRKAA1Q13131 559 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 CYLC2Q14093 348 aaPredicted RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 FSCBQ5H9T9 825 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 TIGD7Q6NT04 549 aaPredicted RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 DUS1LQ6P1R4 473 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 DBF4BQ8NFT6 615 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 SNRNP27Q8WVK2 155 aaKnown RBP14.82□□□□□ -0.04
DDX55-209ENST00000542286 BHMTQ93088 406 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 SPON2Q9BUD6 331 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.82□□□□□ -0.04
DDX55-209ENST00000542286 NCKIPSDQ9NZQ3 722 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 ANKRD6Q9Y2G4 727 aa14.82□□□□□ -0.04
DDX55-209ENST00000542286 PATJQ8NI35 1801 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 SDHDO14521 159 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 CLPTM1O96005 669 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 ATXN1LP0C7T5 689 aaKnown RBP14.81□□□□□ -0.04
DDX55-209ENST00000542286 SLC6A4P31645 630 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 GALK1P51570 392 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 RENBPP51606 427 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 RPS24P62847 133 aaKnown RBP14.81□□□□□ -0.04
DDX55-209ENST00000542286 XIAPP98170 497 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 CEACAM7Q14002 265 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 UGP2Q16851 508 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 CILP2Q8IUL8 1156 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 SCML4Q8N228 414 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 UMODL1-AS1Q8N2C9 162 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 HMGCLL1Q8TB92 370 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 BCL7CQ8WUZ0 217 aaPredicted RBP14.81□□□□□ -0.04
DDX55-209ENST00000542286 PTERQ96BW5 349 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 H3BNX3 289 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 PSMD3O43242 534 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 AP1G1O43747 822 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 RAMP2O60895 175 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 GJB5O95377 273 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 CDKN1CP49918 316 aaPredicted RBP14.81□□□□□ -0.04
DDX55-209ENST00000542286 SGSHP51688 502 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 ZNF135P52742 658 aaPredicted RBP14.81□□□□□ -0.04
DDX55-209ENST00000542286 BTKQ06187 659 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 TECRLQ5HYJ1 363 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 DCP1BQ8IZD4 617 aaKnown RBP14.81□□□□□ -0.04
DDX55-209ENST00000542286 UROC1Q96N76 676 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 SLC39A3Q9BRY0 314 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 PCDHGB4Q9UN71 923 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 PCDHGB5Q9Y5G0 923 aa14.81□□□□□ -0.04
DDX55-209ENST00000542286 COL4A4P53420 1690 aaPredicted RBP14.81□□□□□ -0.04
DDX55-209ENST00000542286 A0A1B0GTL3 188 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 HEATR9A2RTY3 570 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 LDB2O43679 373 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 RHOQP17081 205 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 PAMP19021 973 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 MTTPP55157 894 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 NADK2Q4G0N4 442 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 PITRM1Q5JRX3 1037 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 ZNF549Q6P9A3 640 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 LGI2Q8N0V4 545 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 ICA1LQ8NDH6 482 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 NSUN5Q96P11 429 aaKnown RBP14.8□□□□□ -0.04
DDX55-209ENST00000542286 GCNAQ96QF7 691 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 GKN1Q9NS71 199 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 CCDC167Q9P0B6 97 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 MTMR11A4FU01 709 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 TLR5O60602 858 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 TSPAN3O60637 253 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 TRPA1O75762 1119 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 GOT2P00505 430 aaKnown RBP14.8□□□□□ -0.04
DDX55-209ENST00000542286 PPARGP37231 505 aaPredicted RBP14.8□□□□□ -0.04
DDX55-209ENST00000542286 SLC11A1P49279 550 aa14.8□□□□□ -0.04
DDX55-209ENST00000542286 RALGDSQ12967 914 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms