RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SLC20A2Q08357 652 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 ACSM2AQ08AH3 577 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 GALNT2Q10471 571 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 C2orf68Q2NKX9 166 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 PPP6R3Q5H9R7 873 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 STPG1Q5TH74 334 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 LCTLQ6UWM7 567 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 CYP26C1Q6V0L0 522 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 LRRC8DQ7L1W4 858 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 CIARTQ8N365 385 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 OR2AK2Q8NG84 335 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 FIG4Q92562 907 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 CD101Q93033 1021 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 PABPC5Q96DU9 382 aaKnown RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF570Q96NI8 536 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 MMTAG2Q9BU76 263 aaKnown RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 UBTD1Q9HAC8 227 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 EBF2Q9HAK2 575 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 MAGEE1Q9HCI5 957 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 MKKSQ9NPJ1 570 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 SAGE1Q9NXZ1 904 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 RRN3Q9NYV6 651 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 SLC25A10Q9UBX3 287 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 RCOR1Q9UKL0 485 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 FAM96BQ9Y3D0 163 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 STON1Q9Y6Q2 735 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 TEX13CA0A0J9YWL9 993 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 TNPO2O14787 897 aaKnown RBP3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 MTA2O94776 668 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 MT-CYBP00156 380 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 MMP2P08253 660 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 DDIT3P35638 169 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 CLCN3P51790 818 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 UFM1P61960 85 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 NEDD9Q14511 834 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 PPP2R5BQ15173 497 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 RNPS1Q15287 305 aaKnown RBP3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC9B1Q4ZJI4 515 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 TXNDC8Q6A555 127 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC36A4Q6YBV0 504 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC9B2Q86UD5 537 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 DSELQ8IZU8 1212 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZCCHC9Q8N567 271 aaKnown RBP3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZBTB2Q8N680 514 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 SCCPDHQ8NBX0 429 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 AGBL3Q8NEM8 1001 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 BBS10Q8TAM1 723 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 DUSP19Q8WTR2 217 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 KLHL15Q96M94 604 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 KXD1Q9BQD3 176 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 C17orf75Q9HAS0 396 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 ZNF711Q9Y462 761 aa3.4□□□□□ -1.87
HMGB1P29-201ENST00000505659 GUCY1B2O75343 617 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 RFPL2O75678 378 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 TFP02787 698 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 SP1P08047 785 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 SRCP12931 536 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 HLA-DOBP13765 273 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 GPTP24298 496 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 RELQ04864 619 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 RBBP5Q15291 538 aaKnown RBP3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 TCTN1Q2MV58 587 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 CCNI2Q6ZMN8 369 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 QSOX2Q6ZRP7 698 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 FOXL2NBQ6ZUU3 175 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 EXOC3L1Q86VI1 746 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 SFR1Q86XK3 245 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 CHERPQ8IWX8 916 aaKnown RBP3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 C11orf65Q8NCR3 313 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 HUS1BQ8NHY5 278 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 SCLT1Q96NL6 688 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 PCYT2Q99447 389 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 FUZQ9BT04 418 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 BPIFA1Q9NP55 256 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 LUZP4Q9P127 313 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 HCN3Q9P1Z3 774 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 FBXO9Q9UK97 447 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 VDAC3Q9Y277 283 aa3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 PDS5AQ29RF7 1337 aaKnown RBP3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 ATXN2Q99700 1313 aaKnown RBP3.39□□□□□ -1.87
HMGB1P29-201ENST00000505659 PRR23AA6NEV1 266 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 TMEM202A6NGA9 273 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 GAGE10A6NGK3 116 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 RRN3P2A6NIE6 340 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 SEC31AO94979 1220 aaKnown RBP3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 IFIT1P09914 478 aaKnown RBP3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 HSD3B1P14060 373 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 ITGA2P17301 1181 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 CD58P19256 250 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 KCNA5P22460 613 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 RPP30P78346 268 aaKnown RBP3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 SORDQ00796 357 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 CTF1Q16619 201 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 HIST2H2ACQ16777 129 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 SLC45A4Q5BKX6 768 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 RGMBQ6NW40 437 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 DSTYKQ6XUX3 929 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 LINGO2Q7L985 606 aa3.38□□□□□ -1.87
HMGB1P29-201ENST00000505659 MAB21L3Q8N8X9 362 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms