RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 KCNE1P15382 129 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ARRB2P32121 409 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 BRCC3P46736 316 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CCNHP51946 323 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 NEK2P51955 445 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 DSG1Q02413 1049 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 NAB1Q13506 487 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 DPYSQ14117 519 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ZNF460Q14592 562 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 PAFAH1B3Q15102 231 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 CCL14Q16627 93 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CCDC153Q494R4 210 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SLC9B1Q4ZJI4 515 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 RNF220Q5VTB9 566 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 LPCAT4Q643R3 524 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SLC41A1Q8IVJ1 513 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 KBTBD2Q8IY47 623 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ATPAF2Q8N5M1 289 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 FICDQ9BVA6 458 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ACE2Q9BYF1 805 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 GTSE1Q9NYZ3 720 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SSX2IPQ9Y2D8 614 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MGAMO43451 1857 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 F8W8V4 182 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MTSS1O43312 755 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 FYNP06241 537 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 LINGO3P0C6S8 592 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 AOC1P19801 751 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 TCN1P20061 433 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 LHX1P48742 406 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CRYBB1P53674 252 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 CDH17Q12864 832 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 KLF10Q13118 480 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 GRB14Q14449 540 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SF1Q15637 639 aaKnown RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 INSCQ1MX18 579 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 INAVAQ3KP66 663 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 IL31Q6EBC2 164 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 DENND5AQ6IQ26 1287 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ABHD17CQ6PCB6 329 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 NAPRTQ6XQN6 538 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MAVSQ7Z434 540 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 FGD2Q7Z6J4 655 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 METTL23Q86XA0 190 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SNX32Q86XE0 403 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MYLPFQ96A32 169 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ELMO2Q96JJ3 720 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CATSPER2Q96P56 530 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 LENG8Q96PV6 779 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 OR52B2Q96RD2 323 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SORT1Q99523 831 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 PAAF1Q9BRP4 392 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MLPHQ9BV36 600 aaPredicted RBP5.41□□□□□ -1.54
VAPA-203ENST00000577539 FSD1LQ9BXM9 530 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SPON1Q9HCB6 807 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CYP4F12Q9HCS2 524 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 CNGB3Q9NQW8 809 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 POLG2Q9UHN1 485 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 MID2Q9UJV3 735 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 FBXW11Q9UKB1 542 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ADAM30Q9UKF2 790 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ARHGAP26Q9UNA1 814 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 ST3GAL5Q9UNP4 418 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
VAPA-203ENST00000577539 A0A088AWK7 358 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 I6L893 689 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 NCAM2O15394 837 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 MSI1O43347 362 aaKnown RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 FKBP6O75344 327 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 GSRP00390 522 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 F9P00740 461 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 MPOP05164 745 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 GNAT1P11488 350 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 COX4I1P13073 169 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SP100P23497 879 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 PCSK1P29120 753 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 CD68P34810 354 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 NPY2RP49146 381 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 CPT1AP50416 773 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 CDK7P50613 346 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 PKNOX1P55347 436 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 PCBP4P57723 403 aaKnown RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 MPP1Q00013 466 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 BTBD8Q5XKL5 378 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ARHGAP36Q6ZRI8 547 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 FRMD7Q6ZUT3 714 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ACAD11Q709F0 780 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 CYS1Q717R9 158 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 TAC4Q86UU9 113 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 DENND6AQ8IWF6 608 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 MAPK15Q8TD08 544 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 USP13Q92995 863 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 IL22Q9GZX6 179 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 GBA3Q9H227 469 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 TMEM30AQ9NV96 361 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SLC38A7Q9NVC3 462 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 MIOSQ9NXC5 875 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms