RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 PARVGQ9HBI0 331 aa5.11□□□□□ -1.59
KARSP3-201ENST00000571212 LTB4R2Q9NPC1 389 aa5.11□□□□□ -1.59
KARSP3-201ENST00000571212 ZSCAN32Q9NX65 697 aa5.11□□□□□ -1.59
KARSP3-201ENST00000571212 LARSQ9P2J5 1176 aaKnown RBP5.11□□□□□ -1.59
KARSP3-201ENST00000571212 FEZ2Q9UHY8 353 aaPredicted RBP5.11□□□□□ -1.59
KARSP3-201ENST00000571212 LUC7L2Q9Y383 392 aaKnown RBP5.11□□□□□ -1.59
KARSP3-201ENST00000571212 NEU2Q9Y3R4 380 aa5.11□□□□□ -1.59
KARSP3-201ENST00000571212 HES2Q9Y543 173 aa5.11□□□□□ -1.59
KARSP3-201ENST00000571212 MAP1BP46821 2468 aaKnown RBP5.11□□□□□ -1.59
KARSP3-201ENST00000571212 CNOT1A5YKK6 2376 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 FRYLO94915 3013 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 GOLGA6L4A6NEF3 574 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 WIPF3A6NGB9 483 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 DNAJC9-AS1A6NH13 148 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 PRSS29PA6NIE9 313 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 ACKR2O00590 384 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 EIF3DO15371 548 aaKnown RBP eCLIP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 NCAM2O15394 837 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 FAM189A1O60320 539 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 TBC1D4O60343 1298 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 USO1O60763 962 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 EDN1P05305 212 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 GAP43P17677 238 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 CHRM3P20309 590 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 GPD1P21695 349 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 AKAP5P24588 427 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 ITPKBP27987 946 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 CASP1P29466 404 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 RPS9P46781 194 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 EFNA5P52803 228 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 ATXN1P54253 815 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 NTHL1P78549 312 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 CSTF1Q05048 431 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 PIGFQ07326 219 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 SRSF4Q08170 494 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 ELAVL2Q12926 359 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 STK4Q13043 487 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 MORC3Q14149 939 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 PPP2R5AQ15172 486 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 PSMD5Q16401 504 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 ICE2Q659A1 982 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 PRSS55Q6UWB4 352 aaPredicted RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 RINLQ6ZS11 566 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 C12orf56Q8IXR9 622 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 ZC3H3Q8IXZ2 948 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 RAVER1Q8IY67 606 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 CEP57L1Q8IYX8 460 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 TRIML1Q8N9V2 468 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 B3GALNT2Q8NCR0 500 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 KIAA0895Q8NCT3 520 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 LNX1Q8TBB1 728 aaPredicted RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 SCFD1Q8WVM8 642 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 DPF1Q92782 380 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 HVCN1Q96D96 273 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 SMOQ99835 787 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 CLSTN3Q9BQT9 956 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 RTKNQ9BST9 563 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 C1orf43Q9BWL3 253 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 FGFBP2Q9BYJ0 223 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 POLR3FQ9H1D9 316 aaPredicted RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 SLAMF7Q9NQ25 335 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 OGFRQ9NZT2 677 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 RNF7Q9UBF6 113 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 AGAP1Q9UPQ3 857 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 MRPS17Q9Y2R5 130 aaKnown RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 MTF2Q9Y483 593 aaPredicted RBP5.1□□□□□ -1.59
KARSP3-201ENST00000571212 SPAG17Q6Q759 2223 aa5.1□□□□□ -1.59
KARSP3-201ENST00000571212 PDCD11Q14690 1871 aaKnown RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 WDR27A2RRH5 827 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 CCDC151A5D8V7 595 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 ZNF785A8K8V0 405 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 F5H697 171 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 H0YCG3 227 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 CCL16O15467 120 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 B4GALT5O43286 388 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 TGFB1I1O43294 461 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 VPS4BO75351 444 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 ECI2O75521 394 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 RPN1P04843 607 aaKnown RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 THP07101 528 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 RECQLP46063 649 aaPredicted RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 CASP5P51878 434 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 SNRPFP62306 86 aaKnown RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 POU6F2P78424 691 aaPredicted RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 ENPEPQ07075 957 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 DMP1Q13316 513 aaPredicted RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 ALCAMQ13740 583 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 MYBPC2Q14324 1141 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 HLXQ14774 488 aaPredicted RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 SYCP1Q15431 976 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 ZCWPW2Q504Y3 356 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 XKR4Q5GH76 650 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 ZNF658Q5TYW1 1059 aaPredicted RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 FAM171A1Q5VUB5 890 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 PAPD7Q5XG87 772 aaKnown RBP5.09□□□□□ -1.59
KARSP3-201ENST00000571212 CENPPQ6IPU0 288 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 SLC39A4Q6P5W5 647 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 ZNF852Q6ZMS4 543 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 TPRG1Q6ZUI0 275 aa5.09□□□□□ -1.59
KARSP3-201ENST00000571212 CCDC65Q8IXS2 484 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms