RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DPEP2Q9H4A9 486 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 NOL6Q9H6R4 1146 aaKnown RBP17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 PCDH12Q9NPG4 1184 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 SPATS2LQ9NUQ6 558 aaKnown RBP17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 TMEM248Q9NWD8 314 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 APEX2Q9UBZ4 518 aa17.3■□□□□ 0.36
UBE2D4-209ENST00000454428 CRYBG3Q68DQ2 2970 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 CELSR2Q9HCU4 2923 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 RHOQP17081 205 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 KRT9P35527 623 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 LIG3P49916 1009 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 SNX16P57768 344 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 KIAA1024LP59773 190 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 PTK2Q05397 1052 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 ZSWIM9Q86XI8 627 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 PELI3Q8N2H9 469 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 ATL2Q8NHH9 583 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 HMCESQ96FZ2 354 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 ABHD17AQ96GS6 310 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 SLC45A3Q96JT2 553 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 CATSPER2Q96P56 530 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 SPRY4Q9C004 299 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 SIX2Q9NPC8 291 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 TMEM51Q9NW97 253 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 OR12D3Q9UGF7 316 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 CTNND2Q9UQB3 1225 aa17.29■□□□□ 0.36
UBE2D4-209ENST00000454428 ZNF891A8MT65 544 aaPredicted RBP17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 FOXN3O00409 490 aaPredicted RBP17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 MTSS1O43312 755 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 GNA14O95837 355 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 GM2AP17900 193 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 MMP12P39900 470 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 SUOXP51687 545 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 LIMK2P53671 638 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 STX17P56962 302 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 ELP6Q0PNE2 266 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 UGP2Q16851 508 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 RWDD4Q6NW29 188 aaKnown RBP17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 NRROSQ86YC3 692 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 ART4Q93070 314 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 FAM81BQ96LP2 452 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 DDA1Q9BW61 102 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 LGR4Q9BXB1 951 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 AKAP7Q9P0M2 348 aaPredicted RBP17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 LHX3Q9UBR4 397 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 HPCAL4Q9UM19 191 aa17.28■□□□□ 0.36
UBE2D4-209ENST00000454428 BUB1O43683 1085 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 RAD1O60671 282 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 RAMP2O60895 175 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 LRIG2O94898 1065 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 IGSF6O95976 241 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 PRKCGP05129 697 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 FGF1P05230 155 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 OAS2P29728 719 aaKnown RBP17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 ALDH4A1P30038 563 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 CSF2RBP32927 897 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 ADRA1BP35368 520 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 CLPPQ16740 277 aaPredicted RBP17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 C18orf8Q96DM3 657 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 EXOC2Q96KP1 924 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 RETREG1Q9H6L5 497 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 CYP4F12Q9HCS2 524 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 OCIAD1Q9NX40 245 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 TMEM9Q9P0T7 183 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 PLEKHB1Q9UF11 243 aaPredicted RBP17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 PILRAQ9UKJ1 303 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 ST14Q9Y5Y6 855 aa17.27■□□□□ 0.36
UBE2D4-209ENST00000454428 K7EM74 188 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 TNFRSF10CO14798 259 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 BUB1BO60566 1050 aaPredicted RBP17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 FUCA1P04066 466 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 HOXC4P09017 264 aaPredicted RBP17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 PRKAR1AP10644 381 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 PON1P27169 355 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 TRIM23P36406 574 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 PPP1R2P41236 205 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 RHOAP61586 193 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 ATP11AP98196 1134 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 RAD51Q06609 339 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 CDC20Q12834 499 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 RALGDSQ12967 914 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 CYTH1Q15438 398 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 INO80DQ53TQ3 878 aaPredicted RBP17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 NKAIN2Q5VXU1 208 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 EMC1Q8N766 993 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 HCAR2Q8TDS4 363 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 PATE1Q8WXA2 126 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 SUV39H2Q9H5I1 410 aa17.26■□□□□ 0.35
UBE2D4-209ENST00000454428 CACNA1DQ01668 2161 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 LOC101059948A0A1B0GTJ6 334 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 BICDL2A1A5D9 508 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 ZSCAN5CA6NGD5 496 aaPredicted RBP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 PRR19A6NJB7 356 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 GOLGA8SH3BPF8 625 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 CACNB4O00305 520 aaPredicted RBP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 RECQL5O94762 991 aaPredicted RBP17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 ECEL1O95672 775 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 THRAP10827 490 aa17.25■□□□□ 0.35
UBE2D4-209ENST00000454428 NR1D1P20393 614 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms