RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 A8MX80 341 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TBC1D3LB9A6J9 549 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TTI1O43156 1089 aa15.06■□□□□ 0
NUP54-213ENST00000513352 PSMD3O43242 534 aa15.06■□□□□ 0
NUP54-213ENST00000513352 SLC7A4O43246 635 aa15.06■□□□□ 0
NUP54-213ENST00000513352 PCDH8O95206 1070 aa15.06■□□□□ 0
NUP54-213ENST00000513352 SEMA4FO95754 770 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TBC1D3HP0C7X1 549 aa15.06■□□□□ 0
NUP54-213ENST00000513352 CTAGE8P0CG41 777 aa15.06■□□□□ 0
NUP54-213ENST00000513352 NFKBIAP25963 317 aa15.06■□□□□ 0
NUP54-213ENST00000513352 ACSL1P33121 698 aa15.06■□□□□ 0
NUP54-213ENST00000513352 ADPRHP54922 357 aa15.06■□□□□ 0
NUP54-213ENST00000513352 SEMG2Q02383 582 aa15.06■□□□□ 0
NUP54-213ENST00000513352 RPL6Q02878 288 aaKnown RBP15.06■□□□□ 0
NUP54-213ENST00000513352 UGP2Q16851 508 aa15.06■□□□□ 0
NUP54-213ENST00000513352 MAP7D1Q3KQU3 841 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TBC1D3GQ6DHY5 549 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TBC1D3CQ6IPX1 549 aa15.06■□□□□ 0
NUP54-213ENST00000513352 SLC36A4Q6YBV0 504 aa15.06■□□□□ 0
NUP54-213ENST00000513352 USP45Q70EL2 814 aa15.06■□□□□ 0
NUP54-213ENST00000513352 CTAGE6Q86UF2 777 aa15.06■□□□□ 0
NUP54-213ENST00000513352 JAMLQ86YT9 394 aa15.06■□□□□ 0
NUP54-213ENST00000513352 CTAGE4Q8IX94 777 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TBC1D3Q8IZP1 549 aaPredicted RBP15.06■□□□□ 0
NUP54-213ENST00000513352 DEFB119Q8N690 84 aa15.06■□□□□ 0
NUP54-213ENST00000513352 HCAR2Q8TDS4 363 aa15.06■□□□□ 0
NUP54-213ENST00000513352 SNX19Q92543 992 aa15.06■□□□□ 0
NUP54-213ENST00000513352 RAB7BQ96AH8 199 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TADA1Q96BN2 335 aa15.06■□□□□ 0
NUP54-213ENST00000513352 FEM1CQ96JP0 617 aa15.06■□□□□ 0
NUP54-213ENST00000513352 TBL1YQ9BQ87 522 aa15.06■□□□□ 0
NUP54-213ENST00000513352 APOL2Q9BQE5 337 aa15.06■□□□□ 0
NUP54-213ENST00000513352 GPR174Q9BXC1 333 aa15.06■□□□□ 0
NUP54-213ENST00000513352 SGK2Q9HBY8 427 aa15.06■□□□□ 0
NUP54-213ENST00000513352 PCDH12Q9NPG4 1184 aa15.06■□□□□ 0
NUP54-213ENST00000513352 PHTF1Q9UMS5 762 aa15.06■□□□□ 0
NUP54-213ENST00000513352 THADAQ6YHU6 1953 aa15.05■□□□□ 0
NUP54-213ENST00000513352 PLRG1O43660 514 aaKnown RBP15.05■□□□□ -0
NUP54-213ENST00000513352 NDST3O95803 873 aa15.05■□□□□ -0
NUP54-213ENST00000513352 AGTP01019 485 aa15.05■□□□□ -0
NUP54-213ENST00000513352 IGLV3-19P01714 112 aa15.05■□□□□ -0
NUP54-213ENST00000513352 SLC4A1P02730 911 aa15.05■□□□□ -0
NUP54-213ENST00000513352 APRTP07741 180 aa15.05■□□□□ -0
NUP54-213ENST00000513352 ALPIP09923 528 aa15.05■□□□□ -0
NUP54-213ENST00000513352 ITIH2P19823 946 aa15.05■□□□□ -0
NUP54-213ENST00000513352 BCKDHBP21953 392 aa15.05■□□□□ -0
NUP54-213ENST00000513352 ADCY8P40145 1251 aa15.05■□□□□ -0
NUP54-213ENST00000513352 MRPS25P82663 173 aaKnown RBP15.05■□□□□ -0
NUP54-213ENST00000513352 ELP6Q0PNE2 266 aa15.05■□□□□ -0
NUP54-213ENST00000513352 OLIG2Q13516 323 aa15.05■□□□□ -0
NUP54-213ENST00000513352 PTK6Q13882 451 aa15.05■□□□□ -0
NUP54-213ENST00000513352 DHX34Q14147 1143 aaKnown RBP15.05■□□□□ -0
NUP54-213ENST00000513352 PPP1R21Q6ZMI0 780 aa15.05■□□□□ -0
NUP54-213ENST00000513352 PRR23BQ6ZRT6 265 aa15.05■□□□□ -0
NUP54-213ENST00000513352 SYDE1Q6ZW31 735 aaPredicted RBP15.05■□□□□ -0
NUP54-213ENST00000513352 ZNF572Q7Z3I7 529 aaPredicted RBP15.05■□□□□ -0
NUP54-213ENST00000513352 PDCD7Q8N8D1 485 aaKnown RBP15.05■□□□□ -0
NUP54-213ENST00000513352 CEP112Q8N8E3 955 aa15.05■□□□□ -0
NUP54-213ENST00000513352 CCHCR1Q8TD31 782 aa15.05■□□□□ -0
NUP54-213ENST00000513352 CXorf40AQ8TE69 158 aa15.05■□□□□ -0
NUP54-213ENST00000513352 GAB3Q8WWW8 586 aa15.05■□□□□ -0
NUP54-213ENST00000513352 MRGPRX2Q96LB1 330 aa15.05■□□□□ -0
NUP54-213ENST00000513352 TRIM51Q9BSJ1 452 aa15.05■□□□□ -0
NUP54-213ENST00000513352 WRAP53Q9BUR4 548 aaKnown RBP15.05■□□□□ -0
NUP54-213ENST00000513352 LRRC40Q9H9A6 602 aa15.05■□□□□ -0
NUP54-213ENST00000513352 WSB2Q9NYS7 404 aaPredicted RBP15.05■□□□□ -0
NUP54-213ENST00000513352 MBD1Q9UIS9 605 aaPredicted RBP15.05■□□□□ -0
NUP54-213ENST00000513352 GGT7Q9UJ14 662 aa15.05■□□□□ -0
NUP54-213ENST00000513352 ARIH1Q9Y4X5 557 aaPredicted RBP15.05■□□□□ -0
NUP54-213ENST00000513352 PCDHGA2Q9Y5H1 932 aa15.05■□□□□ -0
NUP54-213ENST00000513352 FADS3Q9Y5Q0 445 aa15.05■□□□□ -0
NUP54-213ENST00000513352 CEP192Q8TEP8 1941 aa15.05■□□□□ -0
NUP54-213ENST00000513352 SPAG17Q6Q759 2223 aa15.04■□□□□ -0
NUP54-213ENST00000513352 ABCA7Q8IZY2 2146 aa15.04■□□□□ -0
NUP54-213ENST00000513352 FZD6O60353 706 aa15.04■□□□□ -0
NUP54-213ENST00000513352 USP12O75317 370 aa15.04■□□□□ -0
NUP54-213ENST00000513352 FSBPO95073 299 aa15.04■□□□□ -0
NUP54-213ENST00000513352 PRLP01236 227 aa15.04■□□□□ -0
NUP54-213ENST00000513352 PIRTP0C851 137 aa15.04■□□□□ -0
NUP54-213ENST00000513352 C7P10643 843 aa15.04■□□□□ -0
NUP54-213ENST00000513352 CYP2A6P11509 494 aaPredicted RBP15.04■□□□□ -0
NUP54-213ENST00000513352 PTGIRP43119 386 aa15.04■□□□□ -0
NUP54-213ENST00000513352 CHRNA4P43681 627 aa15.04■□□□□ -0
NUP54-213ENST00000513352 GRIA4P48058 902 aa15.04■□□□□ -0
NUP54-213ENST00000513352 SUOXP51687 545 aa15.04■□□□□ -0
NUP54-213ENST00000513352 TAS2R38P59533 333 aa15.04■□□□□ -0
NUP54-213ENST00000513352 RPL26P61254 145 aaKnown RBP15.04■□□□□ -0
NUP54-213ENST00000513352 SEMA5AQ13591 1074 aa15.04■□□□□ -0
NUP54-213ENST00000513352 PTPRRQ15256 657 aa15.04■□□□□ -0
NUP54-213ENST00000513352 QPCTQ16769 361 aa15.04■□□□□ -0
NUP54-213ENST00000513352 DENND2CQ68D51 928 aa15.04■□□□□ -0
NUP54-213ENST00000513352 NAPEPLDQ6IQ20 393 aa15.04■□□□□ -0
NUP54-213ENST00000513352 ZC3H14Q6PJT7 736 aaKnown RBP15.04■□□□□ -0
NUP54-213ENST00000513352 MAATS1Q7Z4T9 603 aa15.04■□□□□ -0
NUP54-213ENST00000513352 PRSS33Q8NF86 280 aa15.04■□□□□ -0
NUP54-213ENST00000513352 OR2T34Q8NGX1 318 aa15.04■□□□□ -0
NUP54-213ENST00000513352 PIH1D2Q8WWB5 315 aa15.04■□□□□ -0
NUP54-213ENST00000513352 SLCO2A1Q92959 643 aa15.04■□□□□ -0
NUP54-213ENST00000513352 SMIM14Q96QK8 99 aa15.04■□□□□ -0
NUP54-213ENST00000513352 TRIB3Q96RU7 358 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms