RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MCM7P33993 719 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 KIF11P52732 1056 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 VAV2P52735 878 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 NKX6-1P78426 367 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 DEFA6Q01524 100 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 SULT2A1Q06520 285 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 DMPKQ09013 629 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ATP1A4Q13733 1029 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 MYBPC3Q14896 1274 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ZNF169Q14929 603 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 NECTIN1Q15223 517 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 SYCP1Q15431 976 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 C3AR1Q16581 482 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ADCK5Q3MIX3 580 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 WDR72Q3MJ13 1102 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ARSIQ5FYB1 569 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 EFHC1Q5JVL4 640 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 FAM69BQ5VUD6 431 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 FOXR2Q6PJQ5 311 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 CLEC20AQ6ZU45 233 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 Q6ZUG5 572 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 C17orf82Q86X59 251 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ZNF761Q86XN6 746 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 IRF2BP1Q8IU81 584 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 DMRTC2Q8IXT2 367 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 TMIEQ8NEW7 156 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ATL2Q8NHH9 583 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 DNAJB14Q8TBM8 379 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 SNX29Q8TEQ0 813 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 NOC3LQ8WTT2 800 aaKnown RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ZDHHC1Q8WTX9 485 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 PATE1Q8WXA2 126 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ASB12Q8WXK4 309 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ERCC4Q92889 916 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 KCNN1Q92952 543 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 PPP1R16AQ96I34 528 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 TNIP3Q96KP6 325 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 MAGEB10Q96LZ2 347 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 OR6C1Q96RD1 312 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 TMEM168Q9H0V1 697 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 CLEC4MQ9H2X3 399 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 NEUROD4Q9HD90 331 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 SPATS2LQ9NUQ6 558 aaKnown RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 FAM49BQ9NUQ9 324 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 SIDT1Q9NXL6 827 aaKnown RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 SFMBT1Q9UHJ3 866 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 TINAGQ9UJW2 476 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 FARSAQ9Y285 508 aaKnown RBP6.63□□□□□ -1.35
HDAC3-206ENST00000471968 ITM2BQ9Y287 266 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 STYXL1Q9Y6J8 313 aa6.63□□□□□ -1.35
HDAC3-206ENST00000471968 RASA4BC9J798 803 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 TOR1BO14657 336 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 RASA4O43374 803 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 TNNC2P02585 160 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 PRNPP04156 253 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 FAM163BP0C2L3 166 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 CPA1P15085 419 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 PDGFRAP16234 1089 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 MSX1P28360 303 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 PEX5P50542 639 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 YWHAGP61981 247 aaKnown RBP eCLIP6.62□□□□□ -1.35
HDAC3-206ENST00000471968 SH3BP2P78314 561 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 GPLD1P80108 840 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 KEAP1Q14145 624 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 NFATC4Q14934 902 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.62□□□□□ -1.35
HDAC3-206ENST00000471968 SHEQ5VZ18 495 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 ZNF324BQ6AW86 544 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-206ENST00000471968 PAMR1Q6UXH9 720 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 KCNK18Q7Z418 384 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 ZSCAN30Q86W11 494 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 FAM186BQ8IYM0 893 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 CHST14Q8NCH0 376 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 OR10G6Q8NH81 332 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 PPP4R1Q8TF05 950 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 NR4A3Q92570 626 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 NACC2Q96BF6 587 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 GPATCH1Q9BRR8 931 aaKnown RBP6.62□□□□□ -1.35
HDAC3-206ENST00000471968 LSG1Q9H089 658 aaKnown RBP6.62□□□□□ -1.35
HDAC3-206ENST00000471968 RNF32Q9H0A6 362 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 SMYD3Q9H7B4 428 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 NPDC1Q9NQX5 325 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-206ENST00000471968 INTS13Q9NVM9 706 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 ZNHIT2Q9UHR6 403 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 SNX7Q9UNH6 387 aa6.62□□□□□ -1.35
HDAC3-206ENST00000471968 HBS1LQ9Y450 684 aaKnown RBP6.62□□□□□ -1.35
HDAC3-206ENST00000471968 GOLGA8IPA6NC78 632 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 GOLGA8JA6NMD2 632 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 TMEM110-MUSTN1A8MSY1 372 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 TSPAN6O43657 245 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 AP1G1O43747 822 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 ACSL4O60488 711 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 SLC19A2O60779 497 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 EIF5BO60841 1220 aaKnown RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 CUTAO60888 179 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 GADD45BO75293 160 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-206ENST00000471968 SPAG6O75602 509 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 LEFTY1O75610 366 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 ATE1O95260 518 aa6.61□□□□□ -1.35
HDAC3-206ENST00000471968 RAF1P04049 648 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms