RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PHACTR3Q96KR7 559 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 OR14A2Q96R54 314 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 NDC1Q9BTX1 674 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 HOMER3Q9NSC5 361 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 P4HTMQ9NXG6 502 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 ARHGEF38Q9NXL2 777 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 OGFRQ9NZT2 677 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 RAB21Q9UL25 225 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 OAZ3Q9UMX2 235 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 NR2E1Q9Y466 385 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 TMEM94Q12767 1356 aa5.07□□□□□ -1.6
GABPB1-204ENST00000396464 DENND3A2RUS2 1198 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 EME2A4GXA9 379 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 FAM90A8PA6NJQ4 464 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ANXA2P2A6NMY6 339 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 EIF3CLB5ME19 914 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 E9PLN8 166 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 AGPSO00116 658 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 DCLK1O15075 740 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 AVILO75366 819 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 RAD17O75943 681 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 AKAP3O75969 853 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ALDH1A2O94788 518 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SEC31AO94979 1220 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TGFAP01135 160 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GBAP04062 536 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ASGR1P07306 291 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CYC1P08574 325 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 FAM90A13PP0C7W8 464 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 FAM90A24PP0C7X0 464 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 LYL1P12980 280 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CD19P15391 556 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF8P17098 575 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 AHCYP23526 432 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CHRNA3P32297 505 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 HTR7P34969 479 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 IDUAP35475 653 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 MDH1P40925 334 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 FASLGP48023 281 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 KCNJ1P48048 391 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CAMPP49913 170 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PDE1AP54750 535 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SNU13P55769 128 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PMP22Q01453 160 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PTH1RQ03431 593 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GOLGA8FQ08AF8 430 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 IKQ13123 557 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TAZQ16635 292 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PTCHD3Q3KNS1 767 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 LSM12Q3MHD2 195 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 RUNDC3AQ59EK9 446 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TMEM196Q5HYL7 178 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 MIIPQ5JXC2 388 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 AGBL4Q5VU57 503 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 OTUD7BQ6GQQ9 843 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PM20D1Q6GTS8 502 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 DPY19L2P1Q6NXN4 242 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 MOXD1Q6UVY6 613 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 POLNQ7Z5Q5 900 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ELOA2Q8IYF1 753 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ELMOD2Q8IZ81 293 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 OR52M1Q8NGK5 317 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 DNAJB14Q8TBM8 379 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GRAPLQ8TC17 118 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SCAMP4Q969E2 229 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ITFG2Q969R8 447 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ELMOD3Q96FG2 381 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF668Q96K58 619 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF830Q96NB3 372 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SLC46A1Q96NT5 459 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 VKORC1Q9BQB6 163 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 THUMPD2Q9BTF0 503 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TBCDQ9BTW9 1192 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TEX13AQ9BXU3 409 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GCOM2Q9BZD3 368 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 NACAP1Q9BZK3 213 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 HRH4Q9H3N8 390 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 OSGEPL1Q9H4B0 414 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 COQ10BQ9H8M1 238 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 THAP1Q9NVV9 213 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 C11orf21Q9P2W6 132 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 SAE1Q9UBE0 346 aaPredicted RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TRAF3IP3Q9Y228 551 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 LOC100509620A0A075B734 347 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 OOEPA6NGQ2 149 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 LRRC72A6NJI9 287 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GRM8O00222 908 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CXCL11O14625 94 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 IFIT3O14879 490 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 ANGPT2O15123 496 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CLIC2O15247 247 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CTIFO43310 598 aaKnown RBP5.06□□□□□ -1.6
GABPB1-204ENST00000396464 GMFGO60234 142 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 TACC1O75410 805 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 HAUS5O94927 633 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 IL18BPO95998 194 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 CHEK2O96017 543 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 FAM58BPP0C7Q3 252 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 PRLRP16471 622 aa5.06□□□□□ -1.6
GABPB1-204ENST00000396464 HNF1BP35680 557 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms