RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 BEGAINQ9BUH8 593 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 MAP4K5Q9Y4K4 846 aa6.38□□□□□ -1.39
SMARCB1-208ENST00000634926 PPP1R26Q5T8A7 1209 aaPredicted RBP6.37□□□□□ -1.39
SMARCB1-208ENST00000634926 VASH1Q7L8A9 365 aaPredicted RBP6.37□□□□□ -1.39
SMARCB1-208ENST00000634926 TRMT44Q8IYL2 757 aaKnown RBP6.37□□□□□ -1.39
SMARCB1-208ENST00000634926 CCDC116Q8IYX3 515 aa6.37□□□□□ -1.39
SMARCB1-208ENST00000634926 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
SMARCB1-208ENST00000634926 EMILIN1Q9Y6C2 1016 aa6.37□□□□□ -1.39
SMARCB1-208ENST00000634926 CNTNAP5Q8WYK1 1306 aa6.36□□□□□ -1.39
SMARCB1-208ENST00000634926 PROCP04070 461 aa6.36□□□□□ -1.39
SMARCB1-208ENST00000634926 CELA2BP08218 269 aaPredicted RBP6.36□□□□□ -1.39
SMARCB1-208ENST00000634926 FOXK2Q01167 660 aa6.36□□□□□ -1.39
SMARCB1-208ENST00000634926 GIGYF2Q6Y7W6 1299 aaKnown RBP6.36□□□□□ -1.39
SMARCB1-208ENST00000634926 SV2AQ7L0J3 742 aa6.36□□□□□ -1.39
SMARCB1-208ENST00000634926 KRTAP9-2Q9BYQ4 174 aa6.36□□□□□ -1.39
SMARCB1-208ENST00000634926 MAGEB6P1A0A0J9YX57 407 aa6.35□□□□□ -1.39
SMARCB1-208ENST00000634926 GJA5P36382 358 aa6.35□□□□□ -1.39
SMARCB1-208ENST00000634926 SCARF2Q96GP6 870 aaPredicted RBP6.35□□□□□ -1.39
SMARCB1-208ENST00000634926 DCAF5Q96JK2 942 aa6.35□□□□□ -1.39
SMARCB1-208ENST00000634926 INSM2Q96T92 566 aaPredicted RBP6.35□□□□□ -1.39
SMARCB1-208ENST00000634926 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
SMARCB1-208ENST00000634926 QPCTQ16769 361 aa6.34□□□□□ -1.39
SMARCB1-208ENST00000634926 CSPP1Q1MSJ5 1256 aa6.34□□□□□ -1.39
SMARCB1-208ENST00000634926 MSTNO14793 375 aa6.33□□□□□ -1.4
SMARCB1-208ENST00000634926 TTLL12Q14166 644 aaPredicted RBP6.33□□□□□ -1.4
SMARCB1-208ENST00000634926 AMHR2Q16671 573 aa6.33□□□□□ -1.4
SMARCB1-208ENST00000634926 ERFEQ4G0M1 354 aa6.33□□□□□ -1.4
SMARCB1-208ENST00000634926 RNF217Q8TC41 542 aa6.33□□□□□ -1.4
SMARCB1-208ENST00000634926 CARD14Q9BXL6 1004 aa6.33□□□□□ -1.4
SMARCB1-208ENST00000634926 ZBTB3Q9H5J0 574 aa6.33□□□□□ -1.4
SMARCB1-208ENST00000634926 RELBQ01201 579 aa6.32□□□□□ -1.4
SMARCB1-208ENST00000634926 LIMD1Q9UGP4 676 aa6.32□□□□□ -1.4
SMARCB1-208ENST00000634926 PLCB2Q00722 1185 aa6.31□□□□□ -1.4
SMARCB1-208ENST00000634926 SRSF11Q05519 484 aaKnown RBP6.31□□□□□ -1.4
SMARCB1-208ENST00000634926 RIC3Q7Z5B4 369 aa6.31□□□□□ -1.4
SMARCB1-208ENST00000634926 KDF1Q8NAX2 398 aaPredicted RBP6.31□□□□□ -1.4
SMARCB1-208ENST00000634926 ZNF395Q9H8N7 513 aaPredicted RBP6.31□□□□□ -1.4
SMARCB1-208ENST00000634926 PRPF38BQ5VTL8 546 aaKnown RBP6.3□□□□□ -1.4
SMARCB1-208ENST00000634926 FOXD4L5Q5VV16 416 aaPredicted RBP6.3□□□□□ -1.4
SMARCB1-208ENST00000634926 TSC1Q92574 1164 aa6.3□□□□□ -1.4
SMARCB1-208ENST00000634926 RTL5Q5HYW3 569 aaPredicted RBP6.29□□□□□ -1.4
SMARCB1-208ENST00000634926 PARP9Q8IXQ6 854 aa6.29□□□□□ -1.4
SMARCB1-208ENST00000634926 OCSTAMPQ9BR26 566 aa6.29□□□□□ -1.4
SMARCB1-208ENST00000634926 GPR25O00155 361 aa6.28□□□□□ -1.4
SMARCB1-208ENST00000634926 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
SMARCB1-208ENST00000634926 INTS6LQ5JSJ4 861 aaKnown RBP6.28□□□□□ -1.4
SMARCB1-208ENST00000634926 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMARCB1-208ENST00000634926 POLMQ9NP87 494 aaPredicted RBP6.28□□□□□ -1.4
SMARCB1-208ENST00000634926 LILRB3O75022 631 aa6.27□□□□□ -1.41
SMARCB1-208ENST00000634926 NBPF14Q5TI25 921 aa6.27□□□□□ -1.41
SMARCB1-208ENST00000634926 BARGINQ6ZT62 677 aa6.27□□□□□ -1.41
SMARCB1-208ENST00000634926 Q8N3U1 123 aa6.27□□□□□ -1.41
SMARCB1-208ENST00000634926 KCTD15Q96SI1 283 aaPredicted RBP6.27□□□□□ -1.41
SMARCB1-208ENST00000634926 TMPRSS4Q9NRS4 437 aa6.27□□□□□ -1.41
SMARCB1-208ENST00000634926 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
SMARCB1-208ENST00000634926 MAP3K10Q02779 954 aa6.26□□□□□ -1.41
SMARCB1-208ENST00000634926 ARMC2Q8NEN0 867 aa6.26□□□□□ -1.41
SMARCB1-208ENST00000634926 ACDQ96AP0 544 aa6.26□□□□□ -1.41
SMARCB1-208ENST00000634926 PSMG3-AS1Q96PY0 264 aa6.26□□□□□ -1.41
SMARCB1-208ENST00000634926 ZMYND10O75800 440 aa6.25□□□□□ -1.41
SMARCB1-208ENST00000634926 MYSM1Q5VVJ2 828 aa6.25□□□□□ -1.41
SMARCB1-208ENST00000634926 ZNF837Q96EG3 531 aaPredicted RBP6.25□□□□□ -1.41
SMARCB1-208ENST00000634926 IGF1RP08069 1367 aa6.25□□□□□ -1.41
SMARCB1-208ENST00000634926 KRBA1A5PL33 1030 aa6.24□□□□□ -1.41
SMARCB1-208ENST00000634926 K7ELQ4 463 aaPredicted RBP6.24□□□□□ -1.41
SMARCB1-208ENST00000634926 LILRA1O75019 489 aa6.24□□□□□ -1.41
SMARCB1-208ENST00000634926 RHOQP17081 205 aa6.24□□□□□ -1.41
SMARCB1-208ENST00000634926 DBN1Q16643 649 aa6.24□□□□□ -1.41
SMARCB1-208ENST00000634926 FBXO31Q5XUX0 539 aaPredicted RBP6.24□□□□□ -1.41
SMARCB1-208ENST00000634926 NUTM2BA6NNL0 878 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-208ENST00000634926 NUTM2EB1AL46 878 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-208ENST00000634926 FURINP09958 794 aa6.23□□□□□ -1.41
SMARCB1-208ENST00000634926 SNRPNP63162 240 aaKnown RBP6.23□□□□□ -1.41
SMARCB1-208ENST00000634926 NUTM2DQ5VT03 806 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-208ENST00000634926 NUTM2AQ8IVF1 878 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-208ENST00000634926 ZNF784Q8NCA9 323 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-208ENST00000634926 BCRP11274 1271 aa6.22□□□□□ -1.41
SMARCB1-208ENST00000634926 BAG6P46379 1132 aa6.22□□□□□ -1.41
SMARCB1-208ENST00000634926 CTDSPL2Q05D32 466 aa6.22□□□□□ -1.41
SMARCB1-208ENST00000634926 DIXDC1Q155Q3 683 aa6.22□□□□□ -1.41
SMARCB1-208ENST00000634926 BEND7Q8N7W2 519 aaPredicted RBP6.22□□□□□ -1.41
SMARCB1-208ENST00000634926 MBIPQ9NS73 344 aa6.22□□□□□ -1.41
SMARCB1-208ENST00000634926 PHF20L1A8MW92 1017 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 TULP1O00294 542 aaPredicted RBP6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 ADH1AP07327 375 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 ITGB7P26010 798 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 COL8A1P27658 744 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 PRICKLE2Q7Z3G6 844 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 GALNT6Q8NCL4 622 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 ARHGAP9Q9BRR9 750 aa6.21□□□□□ -1.42
SMARCB1-208ENST00000634926 TRIM66O15016 1216 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 PTGIRP43119 386 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 PDXDC2PQ6P474 469 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 LYSMD3Q7Z3D4 306 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 TRIM22Q8IYM9 498 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 NEDD1Q8NHV4 660 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 LRRN4Q8WUT4 740 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 SLC10A4Q96EP9 437 aa6.2□□□□□ -1.42
SMARCB1-208ENST00000634926 ENAMQ9NRM1 1142 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms