RNA–Protein interactions for RNA: ENST00000630701.1

APOC3-205, Transcript of apolipoprotein C3, humanhuman

TSL 1 (best) BASIC

Gene APOC3, Length 541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-205ENST00000630701 COL14A1Q05707 1796 aaKnown RBP28.31■■■□□ 2.12
APOC3-205ENST00000630701 MAP2P11137 1827 aaKnown RBP28.3■■■□□ 2.12
APOC3-205ENST00000630701 C8orf37Q96NL8 207 aa28.3■■■□□ 2.12
APOC3-205ENST00000630701 BLMP54132 1417 aaPredicted RBP28.29■■■□□ 2.12
APOC3-205ENST00000630701 NGLY1Q96IV0 654 aa28.29■■■□□ 2.12
APOC3-205ENST00000630701 CDK12Q9NYV4 1490 aaPredicted RBP28.28■■■□□ 2.12
APOC3-205ENST00000630701 AXIN2Q9Y2T1 843 aa28.27■■■□□ 2.12
APOC3-205ENST00000630701 COL18A1P39060 1754 aa28.27■■■□□ 2.12
APOC3-205ENST00000630701 PEAK1Q9H792 1746 aa28.26■■■□□ 2.12
APOC3-205ENST00000630701 INSRP06213 1382 aa28.26■■■□□ 2.12
APOC3-205ENST00000630701 LMO7Q8WWI1 1683 aa28.26■■■□□ 2.12
APOC3-205ENST00000630701 HSP90AB2PQ58FF8 381 aa28.26■■■□□ 2.11
APOC3-205ENST00000630701 CFAP53Q96M91 514 aa28.26■■■□□ 2.11
APOC3-205ENST00000630701 FNBP4Q8N3X1 1017 aaPredicted RBP28.25■■■□□ 2.11
APOC3-205ENST00000630701 BTG4Q9NY30 223 aa28.25■■■□□ 2.11
APOC3-205ENST00000630701 SLIT2O94813 1529 aa28.24■■■□□ 2.11
APOC3-205ENST00000630701 CAMTA1Q9Y6Y1 1673 aa28.24■■■□□ 2.11
APOC3-205ENST00000630701 EVA1CP58658 441 aa28.21■■■□□ 2.11
APOC3-205ENST00000630701 PLCH1Q4KWH8 1693 aa28.2■■■□□ 2.11
APOC3-205ENST00000630701 ANKRD24Q8TF21 1146 aa28.2■■■□□ 2.1
APOC3-205ENST00000630701 NWD2Q9ULI1 1742 aa28.2■■■□□ 2.1
APOC3-205ENST00000630701 COL5A2P05997 1499 aaPredicted RBP28.2■■■□□ 2.1
APOC3-205ENST00000630701 ERBB3P21860 1342 aa28.19■■■□□ 2.1
APOC3-205ENST00000630701 UNC5CLQ8IV45 518 aa28.19■■■□□ 2.1
APOC3-205ENST00000630701 AFF2P51816 1311 aa28.18■■■□□ 2.1
APOC3-205ENST00000630701 BCL9LQ86UU0 1499 aa28.17■■■□□ 2.1
APOC3-205ENST00000630701 DIAPH1O60610 1272 aaKnown RBP28.17■■■□□ 2.1
APOC3-205ENST00000630701 LTV1Q96GA3 475 aaPredicted RBP28.17■■■□□ 2.1
APOC3-205ENST00000630701 USP21Q9UK80 565 aa28.17■■■□□ 2.1
APOC3-205ENST00000630701 WDR17Q8IZU2 1322 aa28.17■■■□□ 2.1
APOC3-205ENST00000630701 COL3A1P02461 1466 aaPredicted RBP28.16■■■□□ 2.1
APOC3-205ENST00000630701 CSB-PGBD3P0DP91 1061 aa28.16■■■□□ 2.1
APOC3-205ENST00000630701 EIF4A2Q14240 407 aaKnown RBP28.16■■■□□ 2.1
APOC3-205ENST00000630701 STRN4Q9NRL3 753 aa28.16■■■□□ 2.1
APOC3-205ENST00000630701 IL13P35225 146 aa28.14■■■□□ 2.1
APOC3-205ENST00000630701 MIER1Q8N108 512 aa28.14■■■□□ 2.1
APOC3-205ENST00000630701 RGPD5Q99666 1765 aa28.14■■■□□ 2.09
APOC3-205ENST00000630701 NRAPQ86VF7 1730 aa28.12■■■□□ 2.09
APOC3-205ENST00000630701 LARP1Q6PKG0 1096 aaKnown RBP28.12■■■□□ 2.09
APOC3-205ENST00000630701 NUDCQ9Y266 331 aa28.12■■■□□ 2.09
APOC3-205ENST00000630701 CCER2I3L3R5 266 aa28.11■■■□□ 2.09
APOC3-205ENST00000630701 ZNF772Q68DY9 489 aaPredicted RBP28.11■■■□□ 2.09
APOC3-205ENST00000630701 TOM1L2Q6ZVM7 507 aa28.11■■■□□ 2.09
APOC3-205ENST00000630701 CRB1P82279 1406 aa28.1■■■□□ 2.09
APOC3-205ENST00000630701 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.1■■■□□ 2.09
APOC3-205ENST00000630701 VPS72Q15906 364 aa28.1■■■□□ 2.09
APOC3-205ENST00000630701 NLRP2Q9NX02 1062 aa28.1■■■□□ 2.09
APOC3-205ENST00000630701 MRS2Q9HD23 443 aa28.09■■■□□ 2.09
APOC3-205ENST00000630701 FAM208AQ9UK61 1670 aaKnown RBP28.08■■■□□ 2.09
APOC3-205ENST00000630701 CARD10Q9BWT7 1032 aa28.08■■■□□ 2.09
APOC3-205ENST00000630701 TRPC5Q9UL62 973 aaPredicted RBP28.08■■■□□ 2.09
APOC3-205ENST00000630701 CCDC184Q52MB2 194 aa28.07■■■□□ 2.08
APOC3-205ENST00000630701 NBPF6Q5VWK0 638 aa28.07■■■□□ 2.08
APOC3-205ENST00000630701 NBPF4Q96M43 638 aa28.07■■■□□ 2.08
APOC3-205ENST00000630701 EYA1Q99502 592 aa28.07■■■□□ 2.08
APOC3-205ENST00000630701 PHF23Q9BUL5 403 aaPredicted RBP28.07■■■□□ 2.08
APOC3-205ENST00000630701 ATRNO75882 1429 aa28.06■■■□□ 2.08
APOC3-205ENST00000630701 SPATA31A5Q5VU36 1347 aa28.05■■■□□ 2.08
APOC3-205ENST00000630701 SPATA31A7Q8IWB4 1347 aa28.05■■■□□ 2.08
APOC3-205ENST00000630701 IGSF1Q8N6C5 1336 aa28.05■■■□□ 2.08
APOC3-205ENST00000630701 U2SURPO15042 1029 aaKnown RBP28.04■■■□□ 2.08
APOC3-205ENST00000630701 QTRT2Q9H974 415 aaKnown RBP28.04■■■□□ 2.08
APOC3-205ENST00000630701 CCDC9Q9Y3X0 531 aaKnown RBP28.04■■■□□ 2.08
APOC3-205ENST00000630701 SPATA31A1Q5TZJ5 1347 aa28.03■■■□□ 2.08
APOC3-205ENST00000630701 THRAP3Q9Y2W1 955 aaKnown RBP28.02■■■□□ 2.08
APOC3-205ENST00000630701 NCAPD2Q15021 1401 aa28.01■■■□□ 2.08
APOC3-205ENST00000630701 TCP11L2Q8N4U5 519 aa28.01■■■□□ 2.07
APOC3-205ENST00000630701 RGPD1P0DJD0 1748 aa28.01■■■□□ 2.07
APOC3-205ENST00000630701 U2AF1L5P0DN76 240 aaPredicted RBP28■■■□□ 2.07
APOC3-205ENST00000630701 U2AF1Q01081 240 aaKnown RBP eCLIP28■■■□□ 2.07
APOC3-205ENST00000630701 WDR43Q15061 677 aaKnown RBP eCLIP28■■■□□ 2.07
APOC3-205ENST00000630701 GJD4Q96KN9 370 aaPredicted RBP28■■■□□ 2.07
APOC3-205ENST00000630701 USP35Q9P2H5 1018 aa28■■■□□ 2.07
APOC3-205ENST00000630701 SULT6B1Q6IMI4 303 aa27.99■■■□□ 2.07
APOC3-205ENST00000630701 USHBP1Q8N6Y0 703 aa27.99■■■□□ 2.07
APOC3-205ENST00000630701 RGS17Q9UGC6 210 aaPredicted RBP27.99■■■□□ 2.07
APOC3-205ENST00000630701 PNISRQ8TF01 805 aaKnown RBP27.98■■■□□ 2.07
APOC3-205ENST00000630701 KDRP35968 1356 aa27.98■■■□□ 2.07
APOC3-205ENST00000630701 BARGINQ6ZT62 677 aa27.96■■■□□ 2.07
APOC3-205ENST00000630701 RGPD2P0DJD1 1756 aa27.96■■■□□ 2.07
APOC3-205ENST00000630701 FCHSD2O94868 740 aa27.95■■■□□ 2.06
APOC3-205ENST00000630701 CDCA7Q9BWT1 371 aaPredicted RBP27.95■■■□□ 2.06
APOC3-205ENST00000630701 HMOX1P09601 288 aa27.94■■■□□ 2.06
APOC3-205ENST00000630701 AEBP1Q8IUX7 1158 aa27.94■■■□□ 2.06
APOC3-205ENST00000630701 RAPGEF4Q8WZA2 1011 aa27.94■■■□□ 2.06
APOC3-205ENST00000630701 IL2RBP14784 551 aa27.93■■■□□ 2.06
APOC3-205ENST00000630701 RBM6P78332 1123 aaKnown RBP27.93■■■□□ 2.06
APOC3-205ENST00000630701 PNNQ9H307 717 aaKnown RBP27.93■■■□□ 2.06
APOC3-205ENST00000630701 ADAMTS8Q9UP79 889 aa27.92■■■□□ 2.06
APOC3-205ENST00000630701 GLI3P10071 1580 aa27.91■■■□□ 2.06
APOC3-205ENST00000630701 PLEKHG2Q9H7P9 1386 aa27.91■■■□□ 2.06
APOC3-205ENST00000630701 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
APOC3-205ENST00000630701 TATP17735 454 aaPredicted RBP27.9■■■□□ 2.06
APOC3-205ENST00000630701 DISP2A7MBM2 1401 aa27.9■■■□□ 2.06
APOC3-205ENST00000630701 ONECUT3O60422 494 aaPredicted RBP27.89■■■□□ 2.06
APOC3-205ENST00000630701 RXRBP28702 533 aa27.89■■■□□ 2.06
APOC3-205ENST00000630701 FAM98CQ17RN3 349 aaKnown RBP27.89■■■□□ 2.06
APOC3-205ENST00000630701 POTEAQ6S8J7 498 aa27.89■■■□□ 2.06
APOC3-205ENST00000630701 PRKAR2BP31323 418 aa27.87■■■□□ 2.05
APOC3-205ENST00000630701 MEGF6O75095 1541 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms