RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 RALBP1Q15311 655 aa30.58■■■□□ 2.49
SNRNP70-204ENST00000595231 PRKRIP1Q9H875 184 aaPredicted RBP30.58■■■□□ 2.49
SNRNP70-204ENST00000595231 KIF24Q5T7B8 1368 aa30.58■■■□□ 2.49
SNRNP70-204ENST00000595231 RGPD5Q99666 1765 aa30.58■■■□□ 2.49
SNRNP70-204ENST00000595231 SMG6Q86US8 1419 aaKnown RBP30.57■■■□□ 2.48
SNRNP70-204ENST00000595231 ABCC6O95255 1503 aa30.57■■■□□ 2.48
SNRNP70-204ENST00000595231 BCL9LQ86UU0 1499 aa30.57■■■□□ 2.48
SNRNP70-204ENST00000595231 AFF2P51816 1311 aa30.57■■■□□ 2.48
SNRNP70-204ENST00000595231 NWD2Q9ULI1 1742 aa30.56■■■□□ 2.48
SNRNP70-204ENST00000595231 RTL1A6NKG5 1358 aa30.56■■■□□ 2.48
SNRNP70-204ENST00000595231 PPM1GO15355 546 aaPredicted RBP30.55■■■□□ 2.48
SNRNP70-204ENST00000595231 PPP2R1AP30153 589 aa30.55■■■□□ 2.48
SNRNP70-204ENST00000595231 MTHFSP49914 203 aa30.55■■■□□ 2.48
SNRNP70-204ENST00000595231 FLT4P35916 1363 aa30.54■■■□□ 2.48
SNRNP70-204ENST00000595231 HSP90AB2PQ58FF8 381 aa30.53■■■□□ 2.48
SNRNP70-204ENST00000595231 USP21Q9UK80 565 aa30.52■■■□□ 2.48
SNRNP70-204ENST00000595231 NRAPQ86VF7 1730 aa30.52■■■□□ 2.48
SNRNP70-204ENST00000595231 BLMP54132 1417 aaPredicted RBP30.52■■■□□ 2.48
SNRNP70-204ENST00000595231 UNC5CLQ8IV45 518 aa30.52■■■□□ 2.48
SNRNP70-204ENST00000595231 COL5A2P05997 1499 aaPredicted RBP30.51■■■□□ 2.47
SNRNP70-204ENST00000595231 RGS17Q9UGC6 210 aaPredicted RBP30.5■■■□□ 2.47
SNRNP70-204ENST00000595231 INSRP06213 1382 aa30.5■■■□□ 2.47
SNRNP70-204ENST00000595231 CDK12Q9NYV4 1490 aaPredicted RBP30.48■■■□□ 2.47
SNRNP70-204ENST00000595231 STRN4Q9NRL3 753 aa30.48■■■□□ 2.47
SNRNP70-204ENST00000595231 ERBB3P21860 1342 aa30.48■■■□□ 2.47
SNRNP70-204ENST00000595231 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.48■■■□□ 2.47
SNRNP70-204ENST00000595231 ANP32CO43423 234 aa30.46■■■□□ 2.47
SNRNP70-204ENST00000595231 EVA1CP58658 441 aa30.46■■■□□ 2.47
SNRNP70-204ENST00000595231 ANKRD24Q8TF21 1146 aa30.46■■■□□ 2.47
SNRNP70-204ENST00000595231 MYBBP1AQ9BQG0 1328 aaKnown RBP30.46■■■□□ 2.47
SNRNP70-204ENST00000595231 DIEXFQ68CQ4 756 aaKnown RBP30.46■■■□□ 2.47
SNRNP70-204ENST00000595231 ZNF772Q68DY9 489 aaPredicted RBP30.44■■■□□ 2.46
SNRNP70-204ENST00000595231 LARP1Q6PKG0 1096 aaKnown RBP30.44■■■□□ 2.46
SNRNP70-204ENST00000595231 WDR17Q8IZU2 1322 aa30.43■■■□□ 2.46
SNRNP70-204ENST00000595231 LTV1Q96GA3 475 aaPredicted RBP30.43■■■□□ 2.46
SNRNP70-204ENST00000595231 PHF23Q9BUL5 403 aaPredicted RBP30.42■■■□□ 2.46
SNRNP70-204ENST00000595231 VPS72Q15906 364 aa30.42■■■□□ 2.46
SNRNP70-204ENST00000595231 ATRNO75882 1429 aa30.41■■■□□ 2.46
SNRNP70-204ENST00000595231 EIF4A2Q14240 407 aaKnown RBP30.4■■■□□ 2.46
SNRNP70-204ENST00000595231 QTRT2Q9H974 415 aaKnown RBP30.4■■■□□ 2.46
SNRNP70-204ENST00000595231 TRPC5Q9UL62 973 aaPredicted RBP30.4■■■□□ 2.46
SNRNP70-204ENST00000595231 COL3A1P02461 1466 aaPredicted RBP30.39■■■□□ 2.46
SNRNP70-204ENST00000595231 CSB-PGBD3P0DP91 1061 aa30.39■■■□□ 2.45
SNRNP70-204ENST00000595231 CRB1P82279 1406 aa30.38■■■□□ 2.45
SNRNP70-204ENST00000595231 TOM1L2Q6ZVM7 507 aa30.37■■■□□ 2.45
SNRNP70-204ENST00000595231 SPATA31A5Q5VU36 1347 aa30.37■■■□□ 2.45
SNRNP70-204ENST00000595231 SPATA31A7Q8IWB4 1347 aa30.37■■■□□ 2.45
SNRNP70-204ENST00000595231 RGPD2P0DJD1 1756 aa30.37■■■□□ 2.45
SNRNP70-204ENST00000595231 IL13P35225 146 aa30.36■■■□□ 2.45
SNRNP70-204ENST00000595231 POTEAQ6S8J7 498 aa30.36■■■□□ 2.45
SNRNP70-204ENST00000595231 SPATA31A1Q5TZJ5 1347 aa30.35■■■□□ 2.45
SNRNP70-204ENST00000595231 NBPF6Q5VWK0 638 aa30.35■■■□□ 2.45
SNRNP70-204ENST00000595231 GJD4Q96KN9 370 aaPredicted RBP30.35■■■□□ 2.45
SNRNP70-204ENST00000595231 NBPF4Q96M43 638 aa30.35■■■□□ 2.45
SNRNP70-204ENST00000595231 FAM208AQ9UK61 1670 aaKnown RBP30.34■■■□□ 2.45
SNRNP70-204ENST00000595231 CFAP53Q96M91 514 aa30.34■■■□□ 2.45
SNRNP70-204ENST00000595231 CARD10Q9BWT7 1032 aa30.34■■■□□ 2.45
SNRNP70-204ENST00000595231 NLRP2Q9NX02 1062 aa30.34■■■□□ 2.45
SNRNP70-204ENST00000595231 DIAPH1O60610 1272 aaKnown RBP30.33■■■□□ 2.45
SNRNP70-204ENST00000595231 CCDC9Q9Y3X0 531 aaKnown RBP30.33■■■□□ 2.45
SNRNP70-204ENST00000595231 EYA1Q99502 592 aa30.32■■■□□ 2.44
SNRNP70-204ENST00000595231 USP35Q9P2H5 1018 aa30.32■■■□□ 2.44
SNRNP70-204ENST00000595231 GLI3P10071 1580 aa30.31■■■□□ 2.44
SNRNP70-204ENST00000595231 RGPD1P0DJD0 1748 aa30.28■■■□□ 2.44
SNRNP70-204ENST00000595231 CCDC184Q52MB2 194 aa30.28■■■□□ 2.44
SNRNP70-204ENST00000595231 TCP11L2Q8N4U5 519 aa30.28■■■□□ 2.44
SNRNP70-204ENST00000595231 IGSF1Q8N6C5 1336 aa30.27■■■□□ 2.44
SNRNP70-204ENST00000595231 USHBP1Q8N6Y0 703 aa30.27■■■□□ 2.44
SNRNP70-204ENST00000595231 NCAPD2Q15021 1401 aa30.27■■■□□ 2.44
SNRNP70-204ENST00000595231 RBM6P78332 1123 aaKnown RBP30.27■■■□□ 2.44
SNRNP70-204ENST00000595231 THRAP3Q9Y2W1 955 aaKnown RBP30.27■■■□□ 2.44
SNRNP70-204ENST00000595231 BARGINQ6ZT62 677 aa30.24■■■□□ 2.43
SNRNP70-204ENST00000595231 ONECUT3O60422 494 aaPredicted RBP30.23■■■□□ 2.43
SNRNP70-204ENST00000595231 RXRBP28702 533 aa30.23■■■□□ 2.43
SNRNP70-204ENST00000595231 FAM98CQ17RN3 349 aaKnown RBP30.22■■■□□ 2.43
SNRNP70-204ENST00000595231 U2SURPO15042 1029 aaKnown RBP30.2■■■□□ 2.43
SNRNP70-204ENST00000595231 MIER1Q8N108 512 aa30.2■■■□□ 2.43
SNRNP70-204ENST00000595231 NUDCQ9Y266 331 aa30.2■■■□□ 2.43
SNRNP70-204ENST00000595231 AEBP1Q8IUX7 1158 aa30.2■■■□□ 2.42
SNRNP70-204ENST00000595231 DISP2A7MBM2 1401 aa30.19■■■□□ 2.42
SNRNP70-204ENST00000595231 KDRP35968 1356 aa30.19■■■□□ 2.42
SNRNP70-204ENST00000595231 SULT6B1Q6IMI4 303 aa30.18■■■□□ 2.42
SNRNP70-204ENST00000595231 WNK3Q9BYP7 1800 aa30.17■■■□□ 2.42
SNRNP70-204ENST00000595231 IL2RBP14784 551 aa30.17■■■□□ 2.42
SNRNP70-204ENST00000595231 HMOX1P09601 288 aa30.16■■■□□ 2.42
SNRNP70-204ENST00000595231 MRS2Q9HD23 443 aa30.16■■■□□ 2.42
SNRNP70-204ENST00000595231 THSD7AQ9UPZ6 1657 aa30.15■■■□□ 2.42
SNRNP70-204ENST00000595231 MEGF6O75095 1541 aa30.15■■■□□ 2.42
SNRNP70-204ENST00000595231 U2AF1L5P0DN76 240 aaPredicted RBP30.14■■■□□ 2.42
SNRNP70-204ENST00000595231 U2AF1Q01081 240 aaKnown RBP eCLIP30.14■■■□□ 2.42
SNRNP70-204ENST00000595231 CDCA7Q9BWT1 371 aaPredicted RBP30.14■■■□□ 2.42
SNRNP70-204ENST00000595231 RAPGEF4Q8WZA2 1011 aa30.13■■■□□ 2.41
SNRNP70-204ENST00000595231 SEPT12Q8IYM1 358 aa30.12■■■□□ 2.41
SNRNP70-204ENST00000595231 PARP4Q9UKK3 1724 aaKnown RBP30.11■■■□□ 2.41
SNRNP70-204ENST00000595231 CCER2I3L3R5 266 aa30.11■■■□□ 2.41
SNRNP70-204ENST00000595231 PNISRQ8TF01 805 aaKnown RBP30.1■■■□□ 2.41
SNRNP70-204ENST00000595231 RSPH6AQ9H0K4 717 aa30.1■■■□□ 2.41
SNRNP70-204ENST00000595231 OVOS2A0A0G2JMS6 1433 aa30.1■■■□□ 2.41
SNRNP70-204ENST00000595231 RGS12O14924 1447 aa30.1■■■□□ 2.41
SNRNP70-204ENST00000595231 TATP17735 454 aaPredicted RBP30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms