RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 FBLN1P23142 703 aa30.59■■■□□ 2.49
R3HDM4-205ENST00000589445 ARHGEF25Q86VW2 580 aa30.59■■■□□ 2.49
R3HDM4-205ENST00000589445 BTG4Q9NY30 223 aa30.59■■■□□ 2.49
R3HDM4-205ENST00000589445 USP21Q9UK80 565 aa30.59■■■□□ 2.49
R3HDM4-205ENST00000589445 AATKQ6ZMQ8 1374 aa30.58■■■□□ 2.49
R3HDM4-205ENST00000589445 NPC1L1Q9UHC9 1359 aa30.58■■■□□ 2.49
R3HDM4-205ENST00000589445 RRS1Q15050 365 aaKnown RBP30.58■■■□□ 2.49
R3HDM4-205ENST00000589445 MAP3K19Q56UN5 1328 aa30.57■■■□□ 2.48
R3HDM4-205ENST00000589445 COL5A2P05997 1499 aaPredicted RBP30.57■■■□□ 2.48
R3HDM4-205ENST00000589445 BCL9LQ86UU0 1499 aa30.57■■■□□ 2.48
R3HDM4-205ENST00000589445 FNBP4Q8N3X1 1017 aaPredicted RBP30.55■■■□□ 2.48
R3HDM4-205ENST00000589445 RTL1A6NKG5 1358 aa30.54■■■□□ 2.48
R3HDM4-205ENST00000589445 STRN4Q9NRL3 753 aa30.54■■■□□ 2.48
R3HDM4-205ENST00000589445 FAM208AQ9UK61 1670 aaKnown RBP30.54■■■□□ 2.48
R3HDM4-205ENST00000589445 AMPHP49418 695 aa30.53■■■□□ 2.48
R3HDM4-205ENST00000589445 BLMP54132 1417 aaPredicted RBP30.51■■■□□ 2.47
R3HDM4-205ENST00000589445 PPM1GO15355 546 aaPredicted RBP30.51■■■□□ 2.47
R3HDM4-205ENST00000589445 UNC5CLQ8IV45 518 aa30.51■■■□□ 2.47
R3HDM4-205ENST00000589445 EMILIN1Q9Y6C2 1016 aa30.51■■■□□ 2.47
R3HDM4-205ENST00000589445 CCDC9Q9Y3X0 531 aaKnown RBP30.5■■■□□ 2.47
R3HDM4-205ENST00000589445 FLT4P35916 1363 aa30.5■■■□□ 2.47
R3HDM4-205ENST00000589445 ATRNO75882 1429 aa30.49■■■□□ 2.47
R3HDM4-205ENST00000589445 SMG6Q86US8 1419 aaKnown RBP30.48■■■□□ 2.47
R3HDM4-205ENST00000589445 EVA1CP58658 441 aa30.48■■■□□ 2.47
R3HDM4-205ENST00000589445 RGPD2P0DJD1 1756 aa30.48■■■□□ 2.47
R3HDM4-205ENST00000589445 WNK3Q9BYP7 1800 aa30.47■■■□□ 2.47
R3HDM4-205ENST00000589445 HOXC9P31274 260 aa30.47■■■□□ 2.47
R3HDM4-205ENST00000589445 AXIN2Q9Y2T1 843 aa30.47■■■□□ 2.47
R3HDM4-205ENST00000589445 GLI3P10071 1580 aa30.46■■■□□ 2.47
R3HDM4-205ENST00000589445 TRPC5Q9UL62 973 aaPredicted RBP30.46■■■□□ 2.47
R3HDM4-205ENST00000589445 RGS12O14924 1447 aa30.46■■■□□ 2.47
R3HDM4-205ENST00000589445 CSB-PGBD3P0DP91 1061 aa30.45■■■□□ 2.47
R3HDM4-205ENST00000589445 KIF24Q5T7B8 1368 aa30.44■■■□□ 2.46
R3HDM4-205ENST00000589445 IP6K1Q92551 441 aa30.44■■■□□ 2.46
R3HDM4-205ENST00000589445 LTV1Q96GA3 475 aaPredicted RBP30.44■■■□□ 2.46
R3HDM4-205ENST00000589445 POLKQ9UBT6 870 aa30.43■■■□□ 2.46
R3HDM4-205ENST00000589445 SRCAPQ6ZRS2 3230 aa30.42■■■□□ 2.46
R3HDM4-205ENST00000589445 ANKRD24Q8TF21 1146 aa30.42■■■□□ 2.46
R3HDM4-205ENST00000589445 QTRT2Q9H974 415 aaKnown RBP30.42■■■□□ 2.46
R3HDM4-205ENST00000589445 PARD3Q8TEW0 1356 aa30.41■■■□□ 2.46
R3HDM4-205ENST00000589445 CRB1P82279 1406 aa30.41■■■□□ 2.46
R3HDM4-205ENST00000589445 VPS72Q15906 364 aa30.41■■■□□ 2.46
R3HDM4-205ENST00000589445 LARP1Q6PKG0 1096 aaKnown RBP30.41■■■□□ 2.46
R3HDM4-205ENST00000589445 ERBB3P21860 1342 aa30.41■■■□□ 2.46
R3HDM4-205ENST00000589445 WDR17Q8IZU2 1322 aa30.4■■■□□ 2.46
R3HDM4-205ENST00000589445 INSRP06213 1382 aa30.4■■■□□ 2.46
R3HDM4-205ENST00000589445 RBM6P78332 1123 aaKnown RBP30.39■■■□□ 2.46
R3HDM4-205ENST00000589445 HSP90AB2PQ58FF8 381 aa30.38■■■□□ 2.45
R3HDM4-205ENST00000589445 TOM1L2Q6ZVM7 507 aa30.38■■■□□ 2.45
R3HDM4-205ENST00000589445 USP35Q9P2H5 1018 aa30.38■■■□□ 2.45
R3HDM4-205ENST00000589445 SPATA31A5Q5VU36 1347 aa30.35■■■□□ 2.45
R3HDM4-205ENST00000589445 SPATA31A7Q8IWB4 1347 aa30.35■■■□□ 2.45
R3HDM4-205ENST00000589445 GJD4Q96KN9 370 aaPredicted RBP30.34■■■□□ 2.45
R3HDM4-205ENST00000589445 SPATA31A1Q5TZJ5 1347 aa30.33■■■□□ 2.45
R3HDM4-205ENST00000589445 MTHFSP49914 203 aa30.33■■■□□ 2.45
R3HDM4-205ENST00000589445 NLRP2Q9NX02 1062 aa30.33■■■□□ 2.45
R3HDM4-205ENST00000589445 PPP2R1AP30153 589 aa30.32■■■□□ 2.44
R3HDM4-205ENST00000589445 THSD7AQ9UPZ6 1657 aa30.32■■■□□ 2.44
R3HDM4-205ENST00000589445 A0A0G2JS52 829 aa30.31■■■□□ 2.44
R3HDM4-205ENST00000589445 MYT1Q01538 1121 aa30.31■■■□□ 2.44
R3HDM4-205ENST00000589445 RALBP1Q15311 655 aa30.3■■■□□ 2.44
R3HDM4-205ENST00000589445 PARP4Q9UKK3 1724 aaKnown RBP30.29■■■□□ 2.44
R3HDM4-205ENST00000589445 COL3A1P02461 1466 aaPredicted RBP30.29■■■□□ 2.44
R3HDM4-205ENST00000589445 LRRC37A3O60309 1634 aa30.29■■■□□ 2.44
R3HDM4-205ENST00000589445 FAM98CQ17RN3 349 aaKnown RBP30.28■■■□□ 2.44
R3HDM4-205ENST00000589445 BRWD3Q6RI45 1802 aa30.28■■■□□ 2.44
R3HDM4-205ENST00000589445 RGPD1P0DJD0 1748 aa30.27■■■□□ 2.44
R3HDM4-205ENST00000589445 EIF4A2Q14240 407 aaKnown RBP30.26■■■□□ 2.43
R3HDM4-205ENST00000589445 TCP11L2Q8N4U5 519 aa30.26■■■□□ 2.43
R3HDM4-205ENST00000589445 MYBBP1AQ9BQG0 1328 aaKnown RBP30.25■■■□□ 2.43
R3HDM4-205ENST00000589445 CARD10Q9BWT7 1032 aa30.25■■■□□ 2.43
R3HDM4-205ENST00000589445 USHBP1Q8N6Y0 703 aa30.24■■■□□ 2.43
R3HDM4-205ENST00000589445 CFAP53Q96M91 514 aa30.24■■■□□ 2.43
R3HDM4-205ENST00000589445 PRKRIP1Q9H875 184 aaPredicted RBP30.24■■■□□ 2.43
R3HDM4-205ENST00000589445 ANP32CO43423 234 aa30.21■■■□□ 2.43
R3HDM4-205ENST00000589445 THRAP3Q9Y2W1 955 aaKnown RBP30.2■■■□□ 2.43
R3HDM4-205ENST00000589445 NBPF6Q5VWK0 638 aa30.19■■■□□ 2.42
R3HDM4-205ENST00000589445 NBPF4Q96M43 638 aa30.19■■■□□ 2.42
R3HDM4-205ENST00000589445 DIAPH1O60610 1272 aaKnown RBP30.18■■■□□ 2.42
R3HDM4-205ENST00000589445 DISP2A7MBM2 1401 aa30.18■■■□□ 2.42
R3HDM4-205ENST00000589445 MEGF6O75095 1541 aa30.17■■■□□ 2.42
R3HDM4-205ENST00000589445 BARGINQ6ZT62 677 aa30.17■■■□□ 2.42
R3HDM4-205ENST00000589445 NCAPD2Q15021 1401 aa30.15■■■□□ 2.42
R3HDM4-205ENST00000589445 SEPT12Q8IYM1 358 aa30.15■■■□□ 2.42
R3HDM4-205ENST00000589445 EYA1Q99502 592 aa30.15■■■□□ 2.42
R3HDM4-205ENST00000589445 SHANK3Q9BYB0 1731 aa30.14■■■□□ 2.42
R3HDM4-205ENST00000589445 IL13P35225 146 aa30.14■■■□□ 2.42
R3HDM4-205ENST00000589445 IGSF1Q8N6C5 1336 aa30.14■■■□□ 2.42
R3HDM4-205ENST00000589445 TNS2Q63HR2 1409 aa30.13■■■□□ 2.41
R3HDM4-205ENST00000589445 PKD1L3Q7Z443 1732 aa30.13■■■□□ 2.41
R3HDM4-205ENST00000589445 U2SURPO15042 1029 aaKnown RBP30.12■■■□□ 2.41
R3HDM4-205ENST00000589445 IL2RBP14784 551 aa30.12■■■□□ 2.41
R3HDM4-205ENST00000589445 RAPGEF4Q8WZA2 1011 aa30.11■■■□□ 2.41
R3HDM4-205ENST00000589445 CDCA7Q9BWT1 371 aaPredicted RBP30.1■■■□□ 2.41
R3HDM4-205ENST00000589445 OVOS2A0A0G2JMS6 1433 aa30.09■■■□□ 2.41
R3HDM4-205ENST00000589445 ONECUT3O60422 494 aaPredicted RBP30.07■■■□□ 2.4
R3HDM4-205ENST00000589445 AEBP1Q8IUX7 1158 aa30.07■■■□□ 2.4
R3HDM4-205ENST00000589445 TATP17735 454 aaPredicted RBP30.06■■■□□ 2.4
R3HDM4-205ENST00000589445 DDB1Q16531 1140 aa30.06■■■□□ 2.4
R3HDM4-205ENST00000589445 SULT6B1Q6IMI4 303 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms