RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 TSPY8P0CW00 308 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 TSPY1Q01534 308 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 SFMBT1Q9UHJ3 866 aa6.74□□□□□ -1.33
BRIP1-202ENST00000577598 PTGDRQ13258 359 aa6.73□□□□□ -1.33
BRIP1-202ENST00000577598 DUSP9Q99956 384 aaKnown RBP6.73□□□□□ -1.33
BRIP1-202ENST00000577598 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.73□□□□□ -1.33
BRIP1-202ENST00000577598 C6orf229H3BNL8 230 aa6.73□□□□□ -1.33
BRIP1-202ENST00000577598 PTMAP06454 111 aaKnown RBP6.73□□□□□ -1.33
BRIP1-202ENST00000577598 LARGE2Q8N3Y3 721 aa6.73□□□□□ -1.33
BRIP1-202ENST00000577598 SECISBP2LQ93073 1101 aaKnown RBP6.73□□□□□ -1.33
BRIP1-202ENST00000577598 FAM217BQ9NTX9 383 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-202ENST00000577598 SMAPO00193 183 aa6.73□□□□□ -1.33
BRIP1-202ENST00000577598 ANP32CO43423 234 aa6.73□□□□□ -1.33
BRIP1-202ENST00000577598 FMNL1O95466 1100 aaPredicted RBP6.73□□□□□ -1.33
BRIP1-202ENST00000577598 FAM193AP78312 1265 aa6.73□□□□□ -1.33
BRIP1-202ENST00000577598 ST7Q9NRC1 585 aa6.73□□□□□ -1.33
BRIP1-202ENST00000577598 C11orf96Q7Z7L8 435 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 CREBZFQ9NS37 354 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 USP17L3A6NCW0 530 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 USP17L4A6NCW7 530 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 TRIM37O94972 964 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 DPYDQ12882 1025 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 GNL2Q13823 731 aaKnown RBP6.72□□□□□ -1.33
BRIP1-202ENST00000577598 NR6A1Q15406 480 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 FBXW10Q5XX13 1052 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 USP17L2Q6R6M4 530 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 USP17L1Q7RTZ2 530 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 NOB1Q9ULX3 412 aaKnown RBP6.72□□□□□ -1.33
BRIP1-202ENST00000577598 LONRF3Q496Y0 759 aa6.72□□□□□ -1.33
BRIP1-202ENST00000577598 PPFIA4O75335 1185 aa6.71□□□□□ -1.33
BRIP1-202ENST00000577598 PSMD2Q13200 908 aa6.71□□□□□ -1.33
BRIP1-202ENST00000577598 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.33
BRIP1-202ENST00000577598 RHBDL3P58872 404 aa6.71□□□□□ -1.34
BRIP1-202ENST00000577598 CHMP4BQ9H444 224 aaKnown RBP6.71□□□□□ -1.34
BRIP1-202ENST00000577598 SLAIN2Q9P270 581 aa6.71□□□□□ -1.34
BRIP1-202ENST00000577598 ZHX3Q9H4I2 956 aa6.71□□□□□ -1.34
BRIP1-202ENST00000577598 TBX4P57082 545 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 GRM1Q13255 1194 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 NAP1L2Q9ULW6 460 aaPredicted RBP6.7□□□□□ -1.34
BRIP1-202ENST00000577598 NOP58Q9Y2X3 529 aaKnown RBP6.7□□□□□ -1.34
BRIP1-202ENST00000577598 LDHAP00338 332 aaKnown RBP6.7□□□□□ -1.34
BRIP1-202ENST00000577598 OXLD1Q5BKU9 147 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 CC2D1AQ6P1N0 951 aaPredicted RBP6.7□□□□□ -1.34
BRIP1-202ENST00000577598 TMEM259Q4ZIN3 620 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 KANSL2Q9H9L4 492 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 FAM50BQ9Y247 325 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 CCDC61Q9Y6R9 512 aa6.7□□□□□ -1.34
BRIP1-202ENST00000577598 TLDC2A0PJX2 215 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 METTL3Q86U44 580 aaKnown RBP6.69□□□□□ -1.34
BRIP1-202ENST00000577598 TRIM55Q9BYV6 548 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 PCDH12Q9NPG4 1184 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 HCLS1P14317 486 aaPredicted RBP6.69□□□□□ -1.34
BRIP1-202ENST00000577598 FAM200AQ8TCP9 573 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 GTF3C2Q8WUA4 911 aaPredicted RBP6.69□□□□□ -1.34
BRIP1-202ENST00000577598 FANCLQ9NW38 375 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 USP17L5A8MUK1 530 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 SSBP05455 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRIP1-202ENST00000577598 ZNF76P36508 570 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 LARP1Q6PKG0 1096 aaKnown RBP6.69□□□□□ -1.34
BRIP1-202ENST00000577598 GET4Q7L5D6 327 aaPredicted RBP6.69□□□□□ -1.34
BRIP1-202ENST00000577598 MRGBPQ9NV56 204 aa6.69□□□□□ -1.34
BRIP1-202ENST00000577598 RBM19Q9Y4C8 960 aaKnown RBP6.69□□□□□ -1.34
BRIP1-202ENST00000577598 ATF3P18847 181 aa6.68□□□□□ -1.34
BRIP1-202ENST00000577598 PPM1FP49593 454 aaPredicted RBP6.68□□□□□ -1.34
BRIP1-202ENST00000577598 C2orf72A6NCS6 295 aa6.68□□□□□ -1.34
BRIP1-202ENST00000577598 K7ELQ4 463 aaPredicted RBP6.68□□□□□ -1.34
BRIP1-202ENST00000577598 TRAPPC10P48553 1259 aa6.68□□□□□ -1.34
BRIP1-202ENST00000577598 IRF2BPLQ9H1B7 796 aa6.68□□□□□ -1.34
BRIP1-202ENST00000577598 SCAMP3O14828 347 aaKnown RBP6.68□□□□□ -1.34
BRIP1-202ENST00000577598 MYL3P08590 195 aa6.68□□□□□ -1.34
BRIP1-202ENST00000577598 CEP89Q96ST8 783 aa6.68□□□□□ -1.34
BRIP1-202ENST00000577598 GGT7Q9UJ14 662 aa6.68□□□□□ -1.34
BRIP1-202ENST00000577598 LDHBP07195 334 aaKnown RBP6.67□□□□□ -1.34
BRIP1-202ENST00000577598 MYBP10242 640 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 MAP9Q49MG5 647 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 ZSCAN29Q8IWY8 852 aaPredicted RBP6.67□□□□□ -1.34
BRIP1-202ENST00000577598 KCNB2Q92953 911 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 KLF15Q9UIH9 416 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 DAAM1Q9Y4D1 1078 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 ZNF500O60304 480 aaPredicted RBP6.67□□□□□ -1.34
BRIP1-202ENST00000577598 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 TPCN2Q8NHX9 752 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 PARP2Q9UGN5 583 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 PFDN2Q9UHV9 154 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 ARID5AQ03989 594 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 PARD3BQ8TEW8 1205 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 SPIRE2Q8WWL2 714 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 NEUROD6Q96NK8 337 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 ZC3H4Q9UPT8 1303 aaKnown RBP6.67□□□□□ -1.34
BRIP1-202ENST00000577598 MAFGO15525 162 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 SORBS3O60504 671 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 P4HBP07237 508 aaKnown RBP6.67□□□□□ -1.34
BRIP1-202ENST00000577598 OGFOD1Q8N543 542 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 MRFAP1L1Q96HT8 127 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 NAP1L4Q99733 375 aaKnown RBP6.67□□□□□ -1.34
BRIP1-202ENST00000577598 IER2Q9BTL4 223 aa6.67□□□□□ -1.34
BRIP1-202ENST00000577598 RRM1P23921 792 aa6.66□□□□□ -1.34
BRIP1-202ENST00000577598 EGFLAMQ63HQ2 1017 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms