RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 C1QTNF2Q9BXJ5 285 aa6.25□□□□□ -1.41
SLIRP-202ENST00000553981 CLK2P49760 499 aaKnown RBP6.24□□□□□ -1.41
SLIRP-202ENST00000553981 HELBQ8NG08 1087 aaPredicted RBP6.24□□□□□ -1.41
SLIRP-202ENST00000553981 C6orf118Q5T5N4 469 aa6.23□□□□□ -1.41
SLIRP-202ENST00000553981 NBPF14Q5TI25 921 aa6.23□□□□□ -1.41
SLIRP-202ENST00000553981 SH3BP5LQ7L8J4 393 aa6.23□□□□□ -1.41
SLIRP-202ENST00000553981 URB2Q14146 1524 aaKnown RBP6.23□□□□□ -1.41
SLIRP-202ENST00000553981 FSHRP23945 695 aa6.22□□□□□ -1.41
SLIRP-202ENST00000553981 TRMT44Q8IYL2 757 aaKnown RBP6.22□□□□□ -1.41
SLIRP-202ENST00000553981 ZSCAN1Q8NBB4 408 aa6.22□□□□□ -1.41
SLIRP-202ENST00000553981 POLR3EQ9NVU0 708 aa6.22□□□□□ -1.41
SLIRP-202ENST00000553981 MAP4K5Q9Y4K4 846 aa6.22□□□□□ -1.41
SLIRP-202ENST00000553981 MAGEB6P1A0A0J9YX57 407 aa6.21□□□□□ -1.42
SLIRP-202ENST00000553981 FAM181BA6NEQ2 426 aa6.21□□□□□ -1.42
SLIRP-202ENST00000553981 VASH1Q7L8A9 365 aaPredicted RBP6.21□□□□□ -1.42
SLIRP-202ENST00000553981 LINC00528Q8N1L1 170 aa6.21□□□□□ -1.42
SLIRP-202ENST00000553981 MEIOBQ8N635 442 aa6.21□□□□□ -1.42
SLIRP-202ENST00000553981 RSPH6AQ9H0K4 717 aa6.21□□□□□ -1.42
SLIRP-202ENST00000553981 FANCD2Q9BXW9 1451 aa6.21□□□□□ -1.42
SLIRP-202ENST00000553981 MAN1A2O60476 641 aa6.2□□□□□ -1.42
SLIRP-202ENST00000553981 VSIG8P0DPA2 414 aa6.2□□□□□ -1.42
SLIRP-202ENST00000553981 BMP2P12643 396 aa6.2□□□□□ -1.42
SLIRP-202ENST00000553981 CTDSPL2Q05D32 466 aa6.2□□□□□ -1.42
SLIRP-202ENST00000553981 CARD14Q9BXL6 1004 aa6.2□□□□□ -1.42
SLIRP-202ENST00000553981 CFTRP13569 1480 aa6.2□□□□□ -1.42
SLIRP-202ENST00000553981 UPP2O95045 317 aa6.19□□□□□ -1.42
SLIRP-202ENST00000553981 CCDC116Q8IYX3 515 aa6.19□□□□□ -1.42
SLIRP-202ENST00000553981 GPKOWQ92917 476 aaPredicted RBP eCLIP6.19□□□□□ -1.42
SLIRP-202ENST00000553981 CEP164Q9UPV0 1460 aa6.19□□□□□ -1.42
SLIRP-202ENST00000553981 SOS2Q07890 1332 aaPredicted RBP6.19□□□□□ -1.42
SLIRP-202ENST00000553981 ZNF608Q9ULD9 1512 aaPredicted RBP6.19□□□□□ -1.42
SLIRP-202ENST00000553981 ERFEQ4G0M1 354 aa6.18□□□□□ -1.42
SLIRP-202ENST00000553981 FBXO31Q5XUX0 539 aaPredicted RBP6.18□□□□□ -1.42
SLIRP-202ENST00000553981 EMILIN1Q9Y6C2 1016 aa6.18□□□□□ -1.42
SLIRP-202ENST00000553981 RIMBP3CA6NJZ7 1639 aa6.17□□□□□ -1.42
SLIRP-202ENST00000553981 RIMBP3BA6NNM3 1639 aa6.17□□□□□ -1.42
SLIRP-202ENST00000553981 RIMBP3Q9UFD9 1639 aa6.17□□□□□ -1.42
SLIRP-202ENST00000553981 RSF1Q96T23 1441 aaPredicted RBP6.17□□□□□ -1.42
SLIRP-202ENST00000553981 PPFIA3O75145 1194 aa6.17□□□□□ -1.42
SLIRP-202ENST00000553981 LRRN4Q8WUT4 740 aa6.17□□□□□ -1.42
SLIRP-202ENST00000553981 DNMT3LQ9UJW3 386 aa6.17□□□□□ -1.42
SLIRP-202ENST00000553981 PPP1R26Q5T8A7 1209 aaPredicted RBP6.16□□□□□ -1.42
SLIRP-202ENST00000553981 PDXDC2PQ6P474 469 aa6.16□□□□□ -1.42
SLIRP-202ENST00000553981 TSEN34Q9BSV6 310 aaKnown RBP6.16□□□□□ -1.42
SLIRP-202ENST00000553981 FKBPLQ9UIM3 349 aa6.16□□□□□ -1.42
SLIRP-202ENST00000553981 NR6A1Q15406 480 aa6.15□□□□□ -1.42
SLIRP-202ENST00000553981 SKIV2LQ15477 1246 aaKnown RBP6.15□□□□□ -1.42
SLIRP-202ENST00000553981 ARHGAP9Q9BRR9 750 aa6.15□□□□□ -1.42
SLIRP-202ENST00000553981 CBLBQ13191 982 aa6.14□□□□□ -1.43
SLIRP-202ENST00000553981 SH3D19Q5HYK7 790 aa6.14□□□□□ -1.43
SLIRP-202ENST00000553981 Q6ZVU0 165 aa6.14□□□□□ -1.43
SLIRP-202ENST00000553981 PROCA1Q8NCQ7 364 aaPredicted RBP6.14□□□□□ -1.43
SLIRP-202ENST00000553981 KCTD15Q96SI1 283 aaPredicted RBP6.14□□□□□ -1.43
SLIRP-202ENST00000553981 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.14□□□□□ -1.432e-6■□□□□ 10.5
SLIRP-202ENST00000553981 GPBP1L1Q9HC44 474 aaPredicted RBP6.14□□□□□ -1.43
SLIRP-202ENST00000553981 TTLL8A6PVC2 850 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.13□□□□□ -1.435e-7■■■■□ 21.9
SLIRP-202ENST00000553981 PPP2R2DQ66LE6 453 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 ZBTB33Q86T24 672 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 SLC10A4Q96EP9 437 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 OCSTAMPQ9BR26 566 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 FAM117AQ9C073 453 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 KDM4CQ9H3R0 1056 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 PGPEP1Q9NXJ5 209 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 ZC3H4Q9UPT8 1303 aaKnown RBP6.13□□□□□ -1.43
SLIRP-202ENST00000553981 ARHGEF11O15085 1522 aa6.13□□□□□ -1.43
SLIRP-202ENST00000553981 TOP2AP11388 1531 aaKnown RBP6.13□□□□□ -1.43
SLIRP-202ENST00000553981 FIGNL2A6NMB9 653 aa6.12□□□□□ -1.43
SLIRP-202ENST00000553981 PTSQ03393 145 aa6.12□□□□□ -1.43
SLIRP-202ENST00000553981 CDV3Q9UKY7 258 aaKnown RBP6.12□□□□□ -1.43
SLIRP-202ENST00000553981 CCDC88BA6NC98 1476 aa6.11□□□□□ -1.43
SLIRP-202ENST00000553981 SPINT1O43278 529 aa6.11□□□□□ -1.43
SLIRP-202ENST00000553981 INTS6LQ5JSJ4 861 aaKnown RBP6.11□□□□□ -1.43
SLIRP-202ENST00000553981 GPR161Q8N6U8 529 aaKnown RBP6.11□□□□□ -1.43
SLIRP-202ENST00000553981 EPS8L1Q8TE68 723 aa6.11□□□□□ -1.43
SLIRP-202ENST00000553981 DDRGK1Q96HY6 314 aa6.11□□□□□ -1.43
SLIRP-202ENST00000553981 TOPBP1Q92547 1522 aa6.1□□□□□ -1.43
SLIRP-202ENST00000553981 AP1G2O75843 785 aa6.1□□□□□ -1.43
SLIRP-202ENST00000553981 KRT76Q01546 638 aa6.1□□□□□ -1.43
SLIRP-202ENST00000553981 DHX9Q08211 1270 aaKnown RBP6.1□□□□□ -1.43
SLIRP-202ENST00000553981 ATP1B4Q9UN42 357 aaPredicted RBP6.1□□□□□ -1.43
SLIRP-202ENST00000553981 ARAP1Q96P48 1450 aa6.09□□□□□ -1.43
SLIRP-202ENST00000553981 PTK2Q05397 1052 aa6.09□□□□□ -1.43
SLIRP-202ENST00000553981 ADAM32Q8TC27 787 aa6.09□□□□□ -1.43
SLIRP-202ENST00000553981 AGBL1Q96MI9 1066 aa6.09□□□□□ -1.43
SLIRP-202ENST00000553981 GPSM3Q9Y4H4 160 aa6.09□□□□□ -1.43
SLIRP-202ENST00000553981 AQRO60306 1485 aaKnown RBP eCLIP6.09□□□□□ -1.442e-9■□□□□ 10.8
SLIRP-202ENST00000553981 PRDM2Q13029 1718 aa6.08□□□□□ -1.44
SLIRP-202ENST00000553981 CTSOP43234 321 aaPredicted RBP6.08□□□□□ -1.44
SLIRP-202ENST00000553981 RELBQ01201 579 aa6.08□□□□□ -1.44
SLIRP-202ENST00000553981 CYB5RLQ6IPT4 315 aa6.08□□□□□ -1.44
SLIRP-202ENST00000553981 CCDC155Q8N6L0 562 aa6.08□□□□□ -1.44
SLIRP-202ENST00000553981 NANOS1Q8WY41 292 aaKnown RBP6.08□□□□□ -1.44
SLIRP-202ENST00000553981 HMX1Q9NP08 348 aaPredicted RBP6.08□□□□□ -1.44
SLIRP-202ENST00000553981 EIF4G3O43432 1585 aaKnown RBP6.08□□□□□ -1.44
SLIRP-202ENST00000553981 CHD1O14646 1710 aa6.08□□□□□ -1.44
SLIRP-202ENST00000553981 TARBP1Q13395 1621 aaKnown RBP6.07□□□□□ -1.44
SLIRP-202ENST00000553981 SLC35F4A4IF30 521 aa6.07□□□□□ -1.44
SLIRP-202ENST00000553981 USP17L8P0C7I0 530 aa6.07□□□□□ -1.44
SLIRP-202ENST00000553981 CNTNAP3BQ96NU0 1288 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms