RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 CCDC184Q52MB2 194 aa14.49□□□□□ -0.09
NPIPB3-210ENST00000542817 PRDM11Q9NQV5 511 aa14.49□□□□□ -0.09
NPIPB3-210ENST00000542817 KIF24Q5T7B8 1368 aa14.49□□□□□ -0.09
NPIPB3-210ENST00000542817 BCL9LQ86UU0 1499 aa14.49□□□□□ -0.09
NPIPB3-210ENST00000542817 ABCC6O95255 1503 aa14.49□□□□□ -0.09
NPIPB3-210ENST00000542817 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
NPIPB3-210ENST00000542817 COL14A1Q05707 1796 aaKnown RBP14.48□□□□□ -0.09
NPIPB3-210ENST00000542817 CDK12Q9NYV4 1490 aaPredicted RBP14.47□□□□□ -0.09
NPIPB3-210ENST00000542817 FLT4P35916 1363 aa14.47□□□□□ -0.09
NPIPB3-210ENST00000542817 MYBBP1AQ9BQG0 1328 aaKnown RBP14.47□□□□□ -0.09
NPIPB3-210ENST00000542817 HAP1P54257 671 aaPredicted RBP14.47□□□□□ -0.09
NPIPB3-210ENST00000542817 COL5A2P05997 1499 aaPredicted RBP14.46□□□□□ -0.09
NPIPB3-210ENST00000542817 C8orf37Q96NL8 207 aa14.46□□□□□ -0.09
NPIPB3-210ENST00000542817 RGPD5Q99666 1765 aa14.46□□□□□ -0.09
NPIPB3-210ENST00000542817 NRAPQ86VF7 1730 aa14.46□□□□□ -0.09
NPIPB3-210ENST00000542817 PLCH1Q4KWH8 1693 aa14.46□□□□□ -0.09
NPIPB3-210ENST00000542817 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
NPIPB3-210ENST00000542817 ANP32CO43423 234 aa14.45□□□□□ -0.1
NPIPB3-210ENST00000542817 AMPHP49418 695 aa14.45□□□□□ -0.1
NPIPB3-210ENST00000542817 BTG4Q9NY30 223 aa14.45□□□□□ -0.1
NPIPB3-210ENST00000542817 RGS17Q9UGC6 210 aaPredicted RBP14.45□□□□□ -0.1
NPIPB3-210ENST00000542817 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
NPIPB3-210ENST00000542817 ERBB3P21860 1342 aa14.44□□□□□ -0.1
NPIPB3-210ENST00000542817 PPM1GO15355 546 aaPredicted RBP14.44□□□□□ -0.1
NPIPB3-210ENST00000542817 IL13P35225 146 aa14.44□□□□□ -0.1
NPIPB3-210ENST00000542817 EIF4A2Q14240 407 aaKnown RBP14.44□□□□□ -0.1
NPIPB3-210ENST00000542817 MIER1Q8N108 512 aa14.44□□□□□ -0.1
NPIPB3-210ENST00000542817 AFF2P51816 1311 aa14.44□□□□□ -0.1
NPIPB3-210ENST00000542817 NGLY1Q96IV0 654 aa14.43□□□□□ -0.1
NPIPB3-210ENST00000542817 NWD2Q9ULI1 1742 aa14.43□□□□□ -0.1
NPIPB3-210ENST00000542817 LARP1Q6PKG0 1096 aaKnown RBP14.42□□□□□ -0.1
NPIPB3-210ENST00000542817 UNC5CLQ8IV45 518 aa14.42□□□□□ -0.1
NPIPB3-210ENST00000542817 ANKRD24Q8TF21 1146 aa14.42□□□□□ -0.1
NPIPB3-210ENST00000542817 NCAPD2Q15021 1401 aa14.42□□□□□ -0.1
NPIPB3-210ENST00000542817 NBPF6Q5VWK0 638 aa14.41□□□□□ -0.1
NPIPB3-210ENST00000542817 NBPF4Q96M43 638 aa14.41□□□□□ -0.1
NPIPB3-210ENST00000542817 WDR17Q8IZU2 1322 aa14.41□□□□□ -0.1
NPIPB3-210ENST00000542817 MEX3CQ5U5Q3 659 aaKnown RBP14.41□□□□□ -0.1
NPIPB3-210ENST00000542817 ATRNO75882 1429 aa14.4□□□□□ -0.1
NPIPB3-210ENST00000542817 RGPD1P0DJD0 1748 aa14.4□□□□□ -0.1
NPIPB3-210ENST00000542817 LTV1Q96GA3 475 aaPredicted RBP14.4□□□□□ -0.1
NPIPB3-210ENST00000542817 EYA1Q99502 592 aa14.4□□□□□ -0.1
NPIPB3-210ENST00000542817 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.4□□□□□ -0.1
NPIPB3-210ENST00000542817 USP21Q9UK80 565 aa14.4□□□□□ -0.1
NPIPB3-210ENST00000542817 FAM208AQ9UK61 1670 aaKnown RBP14.39□□□□□ -0.11
NPIPB3-210ENST00000542817 RGPD2P0DJD1 1756 aa14.38□□□□□ -0.11
NPIPB3-210ENST00000542817 SPATA31A5Q5VU36 1347 aa14.38□□□□□ -0.11
NPIPB3-210ENST00000542817 SPATA31A7Q8IWB4 1347 aa14.38□□□□□ -0.11
NPIPB3-210ENST00000542817 IGSF1Q8N6C5 1336 aa14.38□□□□□ -0.11
NPIPB3-210ENST00000542817 DIAPH1O60610 1272 aaKnown RBP14.38□□□□□ -0.11
NPIPB3-210ENST00000542817 VPS72Q15906 364 aa14.38□□□□□ -0.11
NPIPB3-210ENST00000542817 STRN4Q9NRL3 753 aa14.38□□□□□ -0.11
NPIPB3-210ENST00000542817 SPATA31A1Q5TZJ5 1347 aa14.37□□□□□ -0.11
NPIPB3-210ENST00000542817 AEBP1Q8IUX7 1158 aa14.37□□□□□ -0.11
NPIPB3-210ENST00000542817 CARD10Q9BWT7 1032 aa14.37□□□□□ -0.11
NPIPB3-210ENST00000542817 CRB1P82279 1406 aa14.36□□□□□ -0.11
NPIPB3-210ENST00000542817 EP400Q96L91 3159 aa14.36□□□□□ -0.11
NPIPB3-210ENST00000542817 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
NPIPB3-210ENST00000542817 PNISRQ8TF01 805 aaKnown RBP14.36□□□□□ -0.11
NPIPB3-210ENST00000542817 KDRP35968 1356 aa14.36□□□□□ -0.11
NPIPB3-210ENST00000542817 GLI3P10071 1580 aa14.36□□□□□ -0.11
NPIPB3-210ENST00000542817 CCER2I3L3R5 266 aa14.35□□□□□ -0.11
NPIPB3-210ENST00000542817 EVA1CP58658 441 aa14.35□□□□□ -0.11
NPIPB3-210ENST00000542817 POTEAQ6S8J7 498 aa14.35□□□□□ -0.11
NPIPB3-210ENST00000542817 DISP2A7MBM2 1401 aa14.34□□□□□ -0.11
NPIPB3-210ENST00000542817 TOM1L2Q6ZVM7 507 aa14.34□□□□□ -0.11
NPIPB3-210ENST00000542817 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
NPIPB3-210ENST00000542817 QTRT2Q9H974 415 aaKnown RBP14.34□□□□□ -0.11
NPIPB3-210ENST00000542817 NLRP2Q9NX02 1062 aa14.34□□□□□ -0.11
NPIPB3-210ENST00000542817 ONECUT3O60422 494 aaPredicted RBP14.33□□□□□ -0.12
NPIPB3-210ENST00000542817 CSB-PGBD3P0DP91 1061 aa14.33□□□□□ -0.12
NPIPB3-210ENST00000542817 GJD4Q96KN9 370 aaPredicted RBP14.33□□□□□ -0.12
NPIPB3-210ENST00000542817 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
NPIPB3-210ENST00000542817 TRPC5Q9UL62 973 aaPredicted RBP14.33□□□□□ -0.12
NPIPB3-210ENST00000542817 MEGF6O75095 1541 aa14.32□□□□□ -0.12
NPIPB3-210ENST00000542817 ZNF772Q68DY9 489 aaPredicted RBP14.32□□□□□ -0.12
NPIPB3-210ENST00000542817 RSPH6AQ9H0K4 717 aa14.32□□□□□ -0.12
NPIPB3-210ENST00000542817 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
NPIPB3-210ENST00000542817 HMOX1P09601 288 aa14.31□□□□□ -0.12
NPIPB3-210ENST00000542817 SULT6B1Q6IMI4 303 aa14.31□□□□□ -0.12
NPIPB3-210ENST00000542817 TCP11L2Q8N4U5 519 aa14.31□□□□□ -0.12
NPIPB3-210ENST00000542817 USP35Q9P2H5 1018 aa14.31□□□□□ -0.12
NPIPB3-210ENST00000542817 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
NPIPB3-210ENST00000542817 PLEKHF1Q96S99 279 aa14.3□□□□□ -0.12
NPIPB3-210ENST00000542817 THSD7AQ9UPZ6 1657 aa14.29□□□□□ -0.12
NPIPB3-210ENST00000542817 U2SURPO15042 1029 aaKnown RBP14.29□□□□□ -0.12
NPIPB3-210ENST00000542817 U2AF1L5P0DN76 240 aaPredicted RBP14.29□□□□□ -0.12
NPIPB3-210ENST00000542817 U2AF1Q01081 240 aaKnown RBP eCLIP14.29□□□□□ -0.12
NPIPB3-210ENST00000542817 THRAP3Q9Y2W1 955 aaKnown RBP14.29□□□□□ -0.12
NPIPB3-210ENST00000542817 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
NPIPB3-210ENST00000542817 NUDCQ9Y266 331 aa14.28□□□□□ -0.12
NPIPB3-210ENST00000542817 OVOS2A0A0G2JMS6 1433 aa14.27□□□□□ -0.12
NPIPB3-210ENST00000542817 WNK3Q9BYP7 1800 aa14.27□□□□□ -0.12
NPIPB3-210ENST00000542817 FCHSD2O94868 740 aa14.27□□□□□ -0.12
NPIPB3-210ENST00000542817 RBM6P78332 1123 aaKnown RBP14.27□□□□□ -0.12
NPIPB3-210ENST00000542817 FAM98CQ17RN3 349 aaKnown RBP14.27□□□□□ -0.12
NPIPB3-210ENST00000542817 IL2RBP14784 551 aa14.26□□□□□ -0.13
NPIPB3-210ENST00000542817 PRKAR2BP31323 418 aa14.26□□□□□ -0.13
NPIPB3-210ENST00000542817 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
NPIPB3-210ENST00000542817 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms