RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CAMTA1Q9Y6Y1 1673 aa22.95■■□□□ 1.26
SF3B2-211ENST00000531041 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
SF3B2-211ENST00000531041 NGLY1Q96IV0 654 aa22.94■■□□□ 1.26
SF3B2-211ENST00000531041 EMILIN1Q9Y6C2 1016 aa22.94■■□□□ 1.26
SF3B2-211ENST00000531041 IP6K1Q92551 441 aa22.93■■□□□ 1.26
SF3B2-211ENST00000531041 FLT4P35916 1363 aa22.92■■□□□ 1.26
SF3B2-211ENST00000531041 AMPHP49418 695 aa22.92■■□□□ 1.26
SF3B2-211ENST00000531041 FNBP4Q8N3X1 1017 aaPredicted RBP22.92■■□□□ 1.26
SF3B2-211ENST00000531041 BLMP54132 1417 aaPredicted RBP22.92■■□□□ 1.26
SF3B2-211ENST00000531041 PPP2R1AP30153 589 aa22.91■■□□□ 1.26
SF3B2-211ENST00000531041 HOXC9P31274 260 aa22.91■■□□□ 1.26
SF3B2-211ENST00000531041 AXIN2Q9Y2T1 843 aa22.91■■□□□ 1.26
SF3B2-211ENST00000531041 FAM208AQ9UK61 1670 aaKnown RBP22.91■■□□□ 1.26
SF3B2-211ENST00000531041 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
SF3B2-211ENST00000531041 ANP32CO43423 234 aa22.9■■□□□ 1.26
SF3B2-211ENST00000531041 MTHFSP49914 203 aa22.9■■□□□ 1.26
SF3B2-211ENST00000531041 BTG4Q9NY30 223 aa22.9■■□□□ 1.26
SF3B2-211ENST00000531041 COL5A2P05997 1499 aaPredicted RBP22.89■■□□□ 1.26
SF3B2-211ENST00000531041 PPM1GO15355 546 aaPredicted RBP22.89■■□□□ 1.25
SF3B2-211ENST00000531041 RGPD2P0DJD1 1756 aa22.89■■□□□ 1.25
SF3B2-211ENST00000531041 BCL9LQ86UU0 1499 aa22.89■■□□□ 1.25
SF3B2-211ENST00000531041 INSRP06213 1382 aa22.88■■□□□ 1.25
SF3B2-211ENST00000531041 DIEXFQ68CQ4 756 aaKnown RBP22.88■■□□□ 1.25
SF3B2-211ENST00000531041 AFF2P51816 1311 aa22.88■■□□□ 1.25
SF3B2-211ENST00000531041 MYBBP1AQ9BQG0 1328 aaKnown RBP22.88■■□□□ 1.25
SF3B2-211ENST00000531041 HSP90AB2PQ58FF8 381 aa22.86■■□□□ 1.25
SF3B2-211ENST00000531041 UNC5CLQ8IV45 518 aa22.85■■□□□ 1.25
SF3B2-211ENST00000531041 USP21Q9UK80 565 aa22.85■■□□□ 1.25
SF3B2-211ENST00000531041 ERBB3P21860 1342 aa22.84■■□□□ 1.25
SF3B2-211ENST00000531041 EVA1CP58658 441 aa22.82■■□□□ 1.24
SF3B2-211ENST00000531041 COL3A1P02461 1466 aaPredicted RBP22.82■■□□□ 1.24
SF3B2-211ENST00000531041 WDR17Q8IZU2 1322 aa22.82■■□□□ 1.24
SF3B2-211ENST00000531041 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
SF3B2-211ENST00000531041 ZNF772Q68DY9 489 aaPredicted RBP22.81■■□□□ 1.24
SF3B2-211ENST00000531041 STRN4Q9NRL3 753 aa22.81■■□□□ 1.24
SF3B2-211ENST00000531041 CFAP53Q96M91 514 aa22.8■■□□□ 1.24
SF3B2-211ENST00000531041 RGPD1P0DJD0 1748 aa22.8■■□□□ 1.24
SF3B2-211ENST00000531041 ATRNO75882 1429 aa22.79■■□□□ 1.24
SF3B2-211ENST00000531041 LTV1Q96GA3 475 aaPredicted RBP22.79■■□□□ 1.24
SF3B2-211ENST00000531041 CRB1P82279 1406 aa22.78■■□□□ 1.24
SF3B2-211ENST00000531041 EIF4A2Q14240 407 aaKnown RBP22.78■■□□□ 1.24
SF3B2-211ENST00000531041 VPS72Q15906 364 aa22.78■■□□□ 1.24
SF3B2-211ENST00000531041 LARP1Q6PKG0 1096 aaKnown RBP22.78■■□□□ 1.24
SF3B2-211ENST00000531041 WNK3Q9BYP7 1800 aa22.77■■□□□ 1.24
SF3B2-211ENST00000531041 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.24
SF3B2-211ENST00000531041 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
SF3B2-211ENST00000531041 TRPC5Q9UL62 973 aaPredicted RBP22.77■■□□□ 1.24
SF3B2-211ENST00000531041 RGS17Q9UGC6 210 aaPredicted RBP22.76■■□□□ 1.23
SF3B2-211ENST00000531041 DIAPH1O60610 1272 aaKnown RBP22.75■■□□□ 1.23
SF3B2-211ENST00000531041 IL13P35225 146 aa22.75■■□□□ 1.23
SF3B2-211ENST00000531041 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
SF3B2-211ENST00000531041 QTRT2Q9H974 415 aaKnown RBP22.75■■□□□ 1.23
SF3B2-211ENST00000531041 SPATA31A5Q5VU36 1347 aa22.75■■□□□ 1.23
SF3B2-211ENST00000531041 SPATA31A7Q8IWB4 1347 aa22.75■■□□□ 1.23
SF3B2-211ENST00000531041 CARD10Q9BWT7 1032 aa22.74■■□□□ 1.23
SF3B2-211ENST00000531041 GLI3P10071 1580 aa22.74■■□□□ 1.23
SF3B2-211ENST00000531041 SPATA31A1Q5TZJ5 1347 aa22.73■■□□□ 1.23
SF3B2-211ENST00000531041 NCAPD2Q15021 1401 aa22.73■■□□□ 1.23
SF3B2-211ENST00000531041 NBPF6Q5VWK0 638 aa22.73■■□□□ 1.23
SF3B2-211ENST00000531041 NBPF4Q96M43 638 aa22.73■■□□□ 1.23
SF3B2-211ENST00000531041 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
SF3B2-211ENST00000531041 GJD4Q96KN9 370 aaPredicted RBP22.72■■□□□ 1.23
SF3B2-211ENST00000531041 CCDC9Q9Y3X0 531 aaKnown RBP22.72■■□□□ 1.23
SF3B2-211ENST00000531041 EYA1Q99502 592 aa22.71■■□□□ 1.23
SF3B2-211ENST00000531041 IGSF1Q8N6C5 1336 aa22.7■■□□□ 1.23
SF3B2-211ENST00000531041 THRAP3Q9Y2W1 955 aaKnown RBP22.7■■□□□ 1.22
SF3B2-211ENST00000531041 NUDCQ9Y266 331 aa22.69■■□□□ 1.22
SF3B2-211ENST00000531041 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
SF3B2-211ENST00000531041 TCP11L2Q8N4U5 519 aa22.68■■□□□ 1.22
SF3B2-211ENST00000531041 USP35Q9P2H5 1018 aa22.68■■□□□ 1.22
SF3B2-211ENST00000531041 CCDC184Q52MB2 194 aa22.67■■□□□ 1.22
SF3B2-211ENST00000531041 POTEAQ6S8J7 498 aa22.67■■□□□ 1.22
SF3B2-211ENST00000531041 RBM6P78332 1123 aaKnown RBP22.66■■□□□ 1.22
SF3B2-211ENST00000531041 BARGINQ6ZT62 677 aa22.66■■□□□ 1.22
SF3B2-211ENST00000531041 THSD7AQ9UPZ6 1657 aa22.66■■□□□ 1.22
SF3B2-211ENST00000531041 KDRP35968 1356 aa22.66■■□□□ 1.22
SF3B2-211ENST00000531041 MIER1Q8N108 512 aa22.65■■□□□ 1.22
SF3B2-211ENST00000531041 USHBP1Q8N6Y0 703 aa22.65■■□□□ 1.22
SF3B2-211ENST00000531041 U2SURPO15042 1029 aaKnown RBP22.65■■□□□ 1.22
SF3B2-211ENST00000531041 MRS2Q9HD23 443 aa22.64■■□□□ 1.21
SF3B2-211ENST00000531041 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
SF3B2-211ENST00000531041 CCER2I3L3R5 266 aa22.63■■□□□ 1.21
SF3B2-211ENST00000531041 ONECUT3O60422 494 aaPredicted RBP22.63■■□□□ 1.21
SF3B2-211ENST00000531041 RXRBP28702 533 aa22.63■■□□□ 1.21
SF3B2-211ENST00000531041 BRWD3Q6RI45 1802 aa22.62■■□□□ 1.21
SF3B2-211ENST00000531041 FAM98CQ17RN3 349 aaKnown RBP22.62■■□□□ 1.21
SF3B2-211ENST00000531041 SULT6B1Q6IMI4 303 aa22.62■■□□□ 1.21
SF3B2-211ENST00000531041 PKD1L3Q7Z443 1732 aa22.62■■□□□ 1.21
SF3B2-211ENST00000531041 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
SF3B2-211ENST00000531041 IL2RBP14784 551 aa22.61■■□□□ 1.21
SF3B2-211ENST00000531041 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
SF3B2-211ENST00000531041 CDCA7Q9BWT1 371 aaPredicted RBP22.61■■□□□ 1.21
SF3B2-211ENST00000531041 LRRC37A3O60309 1634 aa22.61■■□□□ 1.21
SF3B2-211ENST00000531041 AEBP1Q8IUX7 1158 aa22.6■■□□□ 1.21
SF3B2-211ENST00000531041 MEGF6O75095 1541 aa22.6■■□□□ 1.21
SF3B2-211ENST00000531041 SHANK3Q9BYB0 1731 aa22.6■■□□□ 1.21
SF3B2-211ENST00000531041 HMOX1P09601 288 aa22.59■■□□□ 1.21
SF3B2-211ENST00000531041 RAPGEF4Q8WZA2 1011 aa22.59■■□□□ 1.21
SF3B2-211ENST00000531041 PLEKHG2Q9H7P9 1386 aa22.59■■□□□ 1.21
SF3B2-211ENST00000531041 OVOS2A0A0G2JMS6 1433 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms